Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
COPS6Q7L5N1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC22.19■■□□□ 1.14
COPS6Q7L5N1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC22.19■■□□□ 1.14
COPS6Q7L5N1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC22.19■■□□□ 1.14
COPS6Q7L5N1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC22.19■■□□□ 1.14
COPS6Q7L5N1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
COPS6Q7L5N1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
COPS6Q7L5N1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COPS6Q7L5N1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COPS6Q7L5N1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COPS6Q7L5N1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC22.19■■□□□ 1.14
COPS6Q7L5N1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COPS6Q7L5N1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COPS6Q7L5N1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COPS6Q7L5N1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COPS6Q7L5N1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 MYCLP1-201ENST00000372451 1075 ntBASIC22.18■■□□□ 1.14
COPS6Q7L5N1 LINC00982-205ENST00000420957 435 ntBASIC22.18■■□□□ 1.14
COPS6Q7L5N1 RPS15P9-201ENST00000494093 319 ntBASIC22.18■■□□□ 1.14
COPS6Q7L5N1 RNA5SP416-201ENST00000516838 111 ntBASIC22.18■■□□□ 1.14
COPS6Q7L5N1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 AC064836.3-201ENST00000607928 673 ntBASIC22.18■■□□□ 1.14
COPS6Q7L5N1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC22.18■■□□□ 1.14
COPS6Q7L5N1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 IGHV3-65-201ENST00000523210 341 ntBASIC22.17■■□□□ 1.14
COPS6Q7L5N1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 AL353135.1-201ENST00000606729 504 ntBASIC22.17■■□□□ 1.14
COPS6Q7L5N1 AC008667.4-201ENST00000607370 168 ntBASIC22.17■■□□□ 1.14
COPS6Q7L5N1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 AL354751.1-201ENST00000412768 1863 ntBASIC22.17■■□□□ 1.14
COPS6Q7L5N1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COPS6Q7L5N1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 MIR1233-2-201ENST00000408138 82 ntBASIC22.16■■□□□ 1.14
COPS6Q7L5N1 MIR1233-1-201ENST00000408722 82 ntBASIC22.16■■□□□ 1.14
COPS6Q7L5N1 AC108073.2-201ENST00000464002 357 ntBASIC22.16■■□□□ 1.14
COPS6Q7L5N1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 AC040169.1-201ENST00000565382 521 ntBASIC22.16■■□□□ 1.14
COPS6Q7L5N1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COPS6Q7L5N1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.15■■□□□ 1.14
COPS6Q7L5N1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC22.15■■□□□ 1.14
COPS6Q7L5N1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms