Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA1AQ71U36 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 AC117947.1-201ENST00000427448 529 ntBASIC16.32■□□□□ 0.2
TUBA1AQ71U36 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 AL512604.3-201ENST00000569583 964 ntBASIC16.32■□□□□ 0.2
TUBA1AQ71U36 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 AC099343.3-201ENST00000605834 2503 ntBASIC16.32■□□□□ 0.2
TUBA1AQ71U36 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 PKD1P5-201ENST00000532415 10291 ntBASIC16.32■□□□□ 0.2
TUBA1AQ71U36 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
TUBA1AQ71U36 UBALD1-205ENST00000590891 2641 ntBASIC16.32■□□□□ 0.2
TUBA1AQ71U36 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 MYLKP1-201ENST00000509077 1580 ntBASIC16.31■□□□□ 0.2
TUBA1AQ71U36 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 BX664615.1-201ENST00000443558 458 ntBASIC16.31■□□□□ 0.2
TUBA1AQ71U36 COX11P1-201ENST00000489116 835 ntBASIC16.31■□□□□ 0.2
TUBA1AQ71U36 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA1AQ71U36 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA1AQ71U36 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA1AQ71U36 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBA1AQ71U36 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA1AQ71U36 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA1AQ71U36 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA1AQ71U36 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms