Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFPL4BQ6ZWI9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFPL4BQ6ZWI9 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.86■□□□□ 0.13
RFPL4BQ6ZWI9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFPL4BQ6ZWI9 AL162741.1-201ENST00000565563 1558 ntBASIC15.86■□□□□ 0.13
RFPL4BQ6ZWI9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFPL4BQ6ZWI9 GNAS-203ENST00000306120 1878 ntBASIC15.86■□□□□ 0.13
RFPL4BQ6ZWI9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
RFPL4BQ6ZWI9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFPL4BQ6ZWI9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFPL4BQ6ZWI9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFPL4BQ6ZWI9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.86■□□□□ 0.13
RFPL4BQ6ZWI9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.86■□□□□ 0.13
RFPL4BQ6ZWI9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFPL4BQ6ZWI9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RFPL4BQ6ZWI9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFPL4BQ6ZWI9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 STARP1-201ENST00000397973 869 ntBASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 AC063952.2-201ENST00000498792 1227 ntBASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFPL4BQ6ZWI9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 HOMER2P1-201ENST00000455653 964 ntBASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RFPL4BQ6ZWI9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms