Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 UBALD1-205ENST00000590891 2641 ntBASIC15.44■□□□□ 0.06
C11orf88Q6PI97 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 KRT8P45-201ENST00000414328 1447 ntBASIC15.43■□□□□ 0.06
C11orf88Q6PI97 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 AL121761.2-201ENST00000598007 1648 ntBASIC15.43■□□□□ 0.06
C11orf88Q6PI97 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 TMPOP1-202ENST00000424642 1267 ntBASIC15.43■□□□□ 0.06
C11orf88Q6PI97 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 AP005242.2-201ENST00000580065 1175 ntBASIC15.43■□□□□ 0.06
C11orf88Q6PI97 AP000525.1-201ENST00000608286 694 ntBASIC15.43■□□□□ 0.06
C11orf88Q6PI97 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 AC068587.9-201ENST00000641814 219 ntBASIC15.43■□□□□ 0.06
C11orf88Q6PI97 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 LINC01568-207ENST00000641790 1380 ntBASIC15.43■□□□□ 0.06
C11orf88Q6PI97 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.43■□□□□ 0.06
C11orf88Q6PI97 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
C11orf88Q6PI97 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 RCN1P1-201ENST00000400413 996 ntBASIC15.42■□□□□ 0.06
C11orf88Q6PI97 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 MIR6786-201ENST00000616843 113 ntBASIC15.42■□□□□ 0.06
C11orf88Q6PI97 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 MTMR9LP-203ENST00000426597 1545 ntBASIC15.42■□□□□ 0.06
C11orf88Q6PI97 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C11orf88Q6PI97 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms