Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRNP1Q6NT89 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.32■□□□□ 0.52
TRNP1Q6NT89 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 SLC25A1P3-201ENST00000395415 828 ntBASIC18.32■□□□□ 0.52
TRNP1Q6NT89 TSPY19P-201ENST00000418461 509 ntBASIC18.32■□□□□ 0.52
TRNP1Q6NT89 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 TSPY18P-201ENST00000441642 509 ntBASIC18.32■□□□□ 0.52
TRNP1Q6NT89 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 AP000867.4-201ENST00000641616 219 ntBASIC18.32■□□□□ 0.52
TRNP1Q6NT89 PMPCAP1-201ENST00000508114 1576 ntBASIC18.32■□□□□ 0.52
TRNP1Q6NT89 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRNP1Q6NT89 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 AP001269.4-201ENST00000609611 512 ntBASIC18.31■□□□□ 0.52
TRNP1Q6NT89 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 AC106820.2-201ENST00000563775 3264 ntBASIC18.31■□□□□ 0.52
TRNP1Q6NT89 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRNP1Q6NT89 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 KRT18P31-201ENST00000506277 1292 ntBASIC18.3■□□□□ 0.52
TRNP1Q6NT89 KRT18P56-201ENST00000507275 550 ntBASIC18.3■□□□□ 0.52
TRNP1Q6NT89 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 AL591684.3-201ENST00000605187 298 ntBASIC18.3■□□□□ 0.52
TRNP1Q6NT89 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 AC148477.5-201ENST00000625164 1645 ntBASIC18.3■□□□□ 0.52
TRNP1Q6NT89 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRNP1Q6NT89 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms