Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 AC010460.3-201ENST00000511359 1579 ntBASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRPF38BQ5VTL8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 TEX21P-204ENST00000641479 1693 ntBASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 ALG1L8P-201ENST00000533887 760 ntBASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 AC106872.11-201ENST00000605838 421 ntBASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 LINC01006-201ENST00000333319 2292 ntBASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 AC132938.5-201ENST00000624980 1813 ntBASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRPF38BQ5VTL8 Z82202.1-201ENST00000623446 1880 ntBASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 AL391825.1-201ENST00000457671 1364 ntBASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 AC006538.1-201ENST00000567905 1585 ntBASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 KLF4P1-201ENST00000412782 1185 ntBASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 DFFBP1-201ENST00000433250 979 ntBASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 SNX29P1-201ENST00000548357 1007 ntBASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 MIR4453-201ENST00000584019 89 ntBASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.94■□□□□ 0.62
PRPF38BQ5VTL8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.93■□□□□ 0.62
PRPF38BQ5VTL8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms