Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 AC025062.2-201ENST00000605477 670 ntBASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 AC116407.3-201ENST00000623905 1129 ntBASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF17Q5VTA0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 AC012640.2-201ENST00000561606 901 ntBASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF17Q5VTA0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 COX5BP2-201ENST00000392354 334 ntBASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF17Q5VTA0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms