Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF20Q5VT98 AP005117.1-201ENST00000584346 1413 ntBASIC16.17■□□□□ 0.18
PRAMEF20Q5VT98 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF20Q5VT98 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF20Q5VT98 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF20Q5VT98 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF20Q5VT98 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF20Q5VT98 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF20Q5VT98 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF20Q5VT98 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF20Q5VT98 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 BX276092.7-203ENST00000637198 1536 ntBASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 RBM17P3-201ENST00000417687 1192 ntBASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 AC122714.2-201ENST00000502787 707 ntBASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEF20Q5VT98 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 AC012317.2-201ENST00000623305 2251 ntBASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 MRPL3P1-201ENST00000400109 1033 ntBASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 DDX43P3-201ENST00000441064 443 ntBASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 FAM197Y8-203ENST00000450145 560 ntBASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 FGFR3P6-201ENST00000457012 610 ntBASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF20Q5VT98 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.14■□□□□ 0.18
PRAMEF20Q5VT98 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.14■□□□□ 0.18
PRAMEF20Q5VT98 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
PRAMEF20Q5VT98 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.14■□□□□ 0.18
PRAMEF20Q5VT98 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.14■□□□□ 0.17
PRAMEF20Q5VT98 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF20Q5VT98 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF20Q5VT98 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF20Q5VT98 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF20Q5VT98 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PRAMEF20Q5VT98 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF20Q5VT98 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PRAMEF20Q5VT98 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF20Q5VT98 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF20Q5VT98 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.14■□□□□ 0.17
PRAMEF20Q5VT98 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEF20Q5VT98 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms