Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.37■□□□□ 0.05
ATPAF1Q5TC12 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.37■□□□□ 0.05
ATPAF1Q5TC12 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ATPAF1Q5TC12 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATPAF1Q5TC12 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ATPAF1Q5TC12 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.37■□□□□ 0.05
ATPAF1Q5TC12 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ATPAF1Q5TC12 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.37■□□□□ 0.05
ATPAF1Q5TC12 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ATPAF1Q5TC12 GMCL1P1-201ENST00000463439 1581 ntBASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 PVRIG2P-201ENST00000435460 978 ntBASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATPAF1Q5TC12 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 SDHAP2-201ENST00000455183 2001 ntBASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 AL157888.1-201ENST00000631930 593 ntBASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATPAF1Q5TC12 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms