Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 ELK1P1-201ENST00000485699 580 ntBASIC9.51□□□□□ -0.89
UBR4Q5T4S7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 SNX15-201ENST00000352068 771 ntTSL 5 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 CXCL1P1-201ENST00000502804 216 ntBASIC9.51□□□□□ -0.89
UBR4Q5T4S7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC9.51□□□□□ -0.89
UBR4Q5T4S7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 CTBP2P5-201ENST00000454986 1264 ntBASIC9.5□□□□□ -0.89
UBR4Q5T4S7 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 Z82202.1-201ENST00000623446 1880 ntBASIC9.5□□□□□ -0.89
UBR4Q5T4S7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 AC138627.1-207ENST00000641560 1006 ntBASIC9.5□□□□□ -0.89
UBR4Q5T4S7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 IRX1P1-201ENST00000438849 1838 ntBASIC9.5□□□□□ -0.89
UBR4Q5T4S7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 AC022966.2-201ENST00000587434 367 ntBASIC9.5□□□□□ -0.89
UBR4Q5T4S7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC9.5□□□□□ -0.89
UBR4Q5T4S7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 AC093677.2-201ENST00000600169 1863 ntBASIC9.49□□□□□ -0.89
UBR4Q5T4S7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 CDC14C-201ENST00000428251 1719 ntBASIC9.49□□□□□ -0.89
UBR4Q5T4S7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 AC009542.2-202ENST00000619004 1067 ntBASIC9.49□□□□□ -0.89
UBR4Q5T4S7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 AL512408.1-201ENST00000569378 2000 ntBASIC9.49□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms