Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 KRT18P58-201ENST00000527480 1120 ntBASIC21.27■■□□□ 1
RFX7Q2KHR2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.27■■□□□ 1
RFX7Q2KHR2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
RFX7Q2KHR2 AD001527.2-201ENST00000622994 785 ntBASIC21.27■■□□□ 1
RFX7Q2KHR2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFX7Q2KHR2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
RFX7Q2KHR2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFX7Q2KHR2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RFX7Q2KHR2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFX7Q2KHR2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFX7Q2KHR2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.26■□□□□ 0.99
RFX7Q2KHR2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.26■□□□□ 0.99
RFX7Q2KHR2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFX7Q2KHR2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.26■□□□□ 0.99
RFX7Q2KHR2 AC093909.1-201ENST00000504731 1122 ntBASIC21.26■□□□□ 0.99
RFX7Q2KHR2 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.26■□□□□ 0.99
RFX7Q2KHR2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.26■□□□□ 0.99
RFX7Q2KHR2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.26■□□□□ 0.99
RFX7Q2KHR2 AL139327.4-201ENST00000612362 153 ntBASIC21.26■□□□□ 0.99
RFX7Q2KHR2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFX7Q2KHR2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFX7Q2KHR2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RFX7Q2KHR2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
RFX7Q2KHR2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFX7Q2KHR2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 GPALPP1-207ENST00000611650 899 ntBASIC21.25■□□□□ 0.99
RFX7Q2KHR2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RFX7Q2KHR2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 STK25P1-201ENST00000585406 838 ntBASIC21.24■□□□□ 0.99
RFX7Q2KHR2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 PMPCAP1-201ENST00000508114 1576 ntBASIC21.24■□□□□ 0.99
RFX7Q2KHR2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 AC079776.2-201ENST00000641154 1609 ntBASIC21.24■□□□□ 0.99
RFX7Q2KHR2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFX7Q2KHR2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 AC098831.1-202ENST00000438821 336 ntBASIC21.23■□□□□ 0.99
RFX7Q2KHR2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 POLD2P1-201ENST00000511220 997 ntBASIC21.23■□□□□ 0.99
RFX7Q2KHR2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 NKAPP1-205ENST00000585790 367 ntBASIC21.23■□□□□ 0.99
RFX7Q2KHR2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 AC008735.5-201ENST00000623544 497 ntBASIC21.23■□□□□ 0.99
RFX7Q2KHR2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 SIRPAP1-201ENST00000448467 1770 ntBASIC21.23■□□□□ 0.99
RFX7Q2KHR2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 RPL13AP23-201ENST00000480739 586 ntBASIC21.23■□□□□ 0.99
RFX7Q2KHR2 IGHV3-52-201ENST00000519770 353 ntBASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms