Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.05■□□□□ 0.32
CACNA1EQ15878 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.05■□□□□ 0.32
CACNA1EQ15878 AC087641.1-201ENST00000557561 1021 ntBASIC17.05■□□□□ 0.32
CACNA1EQ15878 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA1EQ15878 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.05■□□□□ 0.32
CACNA1EQ15878 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA1EQ15878 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA1EQ15878 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA1EQ15878 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CACNA1EQ15878 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.05■□□□□ 0.32
CACNA1EQ15878 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA1EQ15878 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CACNA1EQ15878 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.05■□□□□ 0.32
CACNA1EQ15878 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.05■□□□□ 0.32
CACNA1EQ15878 AL590787.1-201ENST00000568856 1315 ntBASIC17.05■□□□□ 0.32
CACNA1EQ15878 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA1EQ15878 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.05■□□□□ 0.32
CACNA1EQ15878 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA1EQ15878 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.05■□□□□ 0.32
CACNA1EQ15878 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.05■□□□□ 0.32
CACNA1EQ15878 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CACNA1EQ15878 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA1EQ15878 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA1EQ15878 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CACNA1EQ15878 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CACNA1EQ15878 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA1EQ15878 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CACNA1EQ15878 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA1EQ15878 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA1EQ15878 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
CACNA1EQ15878 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.05■□□□□ 0.32
CACNA1EQ15878 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA1EQ15878 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA1EQ15878 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.04■□□□□ 0.32
CACNA1EQ15878 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.04■□□□□ 0.32
CACNA1EQ15878 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.04■□□□□ 0.32
CACNA1EQ15878 AC015911.4-201ENST00000588022 1070 ntBASIC17.04■□□□□ 0.32
CACNA1EQ15878 Z92544.3-201ENST00000624747 417 ntBASIC17.04■□□□□ 0.32
CACNA1EQ15878 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 AC135776.1-201ENST00000319817 2481 ntBASIC17.04■□□□□ 0.32
CACNA1EQ15878 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.04■□□□□ 0.32
CACNA1EQ15878 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 REXO1L11P-201ENST00000620964 1927 ntBASIC17.04■□□□□ 0.32
CACNA1EQ15878 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.04■□□□□ 0.32
CACNA1EQ15878 KRT18P32-201ENST00000424695 1287 ntBASIC17.04■□□□□ 0.32
CACNA1EQ15878 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.04■□□□□ 0.32
CACNA1EQ15878 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.04■□□□□ 0.32
CACNA1EQ15878 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CACNA1EQ15878 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.04■□□□□ 0.32
CACNA1EQ15878 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.04■□□□□ 0.32
CACNA1EQ15878 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA1EQ15878 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.04■□□□□ 0.32
CACNA1EQ15878 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.03■□□□□ 0.32
CACNA1EQ15878 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 AC099522.2-201ENST00000607001 744 ntBASIC17.03■□□□□ 0.32
CACNA1EQ15878 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms