Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD47Q08722 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD47Q08722 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.41■□□□□ 0.22
CD47Q08722 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.41■□□□□ 0.22
CD47Q08722 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD47Q08722 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD47Q08722 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.41■□□□□ 0.22
CD47Q08722 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CD47Q08722 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.41■□□□□ 0.22
CD47Q08722 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD47Q08722 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.41■□□□□ 0.22
CD47Q08722 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CD47Q08722 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD47Q08722 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.41■□□□□ 0.22
CD47Q08722 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.41■□□□□ 0.22
CD47Q08722 AC010653.2-201ENST00000623505 997 ntBASIC16.41■□□□□ 0.22
CD47Q08722 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CD47Q08722 KRT8P9-201ENST00000558927 1449 ntBASIC16.41■□□□□ 0.22
CD47Q08722 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD47Q08722 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CD47Q08722 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD47Q08722 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.41■□□□□ 0.22
CD47Q08722 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CD47Q08722 CYP2D8P-201ENST00000433633 1490 ntBASIC16.41■□□□□ 0.22
CD47Q08722 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
CD47Q08722 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.41■□□□□ 0.22
CD47Q08722 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD47Q08722 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD47Q08722 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.4■□□□□ 0.22
CD47Q08722 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.4■□□□□ 0.22
CD47Q08722 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.4■□□□□ 0.22
CD47Q08722 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CD47Q08722 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.4■□□□□ 0.22
CD47Q08722 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.4■□□□□ 0.22
CD47Q08722 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.4■□□□□ 0.22
CD47Q08722 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.4■□□□□ 0.22
CD47Q08722 DUTP2-201ENST00000519164 463 ntBASIC16.4■□□□□ 0.22
CD47Q08722 WWOX-216ENST00000569818 525 ntBASIC16.4■□□□□ 0.22
CD47Q08722 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CD47Q08722 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.4■□□□□ 0.22
CD47Q08722 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CD47Q08722 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CD47Q08722 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD47Q08722 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.4■□□□□ 0.22
CD47Q08722 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CD47Q08722 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
CD47Q08722 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.39■□□□□ 0.21
CD47Q08722 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD47Q08722 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD47Q08722 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD47Q08722 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.39■□□□□ 0.21
CD47Q08722 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
CD47Q08722 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.39■□□□□ 0.21
CD47Q08722 KRT8P7-201ENST00000533003 1432 ntBASIC16.39■□□□□ 0.21
CD47Q08722 HOXB1-202ENST00000577092 1414 ntBASIC16.39■□□□□ 0.21
CD47Q08722 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD47Q08722 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
CD47Q08722 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD47Q08722 AL596275.1-201ENST00000423464 877 ntBASIC16.39■□□□□ 0.21
CD47Q08722 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD47Q08722 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.39■□□□□ 0.21
CD47Q08722 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.39■□□□□ 0.21
CD47Q08722 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD47Q08722 AC066615.1-201ENST00000640911 628 ntBASIC16.39■□□□□ 0.21
CD47Q08722 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CD47Q08722 AC008741.2-201ENST00000612792 3115 ntBASIC16.39■□□□□ 0.21
CD47Q08722 AC060834.1-201ENST00000443027 2032 ntBASIC16.39■□□□□ 0.21
CD47Q08722 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD47Q08722 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD47Q08722 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD47Q08722 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD47Q08722 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD47Q08722 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD47Q08722 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD47Q08722 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD47Q08722 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD47Q08722 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD47Q08722 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.38■□□□□ 0.21
CD47Q08722 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms