Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.02■□□□□ 0.32
HMGCS1Q01581 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HMGCS1Q01581 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCS1Q01581 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCS1Q01581 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.02■□□□□ 0.32
HMGCS1Q01581 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCS1Q01581 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
HMGCS1Q01581 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
HMGCS1Q01581 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGCS1Q01581 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.02■□□□□ 0.32
HMGCS1Q01581 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGCS1Q01581 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.02■□□□□ 0.31
HMGCS1Q01581 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGCS1Q01581 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HMGCS1Q01581 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
HMGCS1Q01581 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGCS1Q01581 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
HMGCS1Q01581 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 BX276092.7-203ENST00000637198 1536 ntBASIC17.01■□□□□ 0.31
HMGCS1Q01581 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
HMGCS1Q01581 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGCS1Q01581 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HMGCS1Q01581 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HMGCS1Q01581 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 Z83836.1-201ENST00000624605 1642 ntBASIC17.01■□□□□ 0.31
HMGCS1Q01581 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.01■□□□□ 0.31
HMGCS1Q01581 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HMGCS1Q01581 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
HMGCS1Q01581 SPDYE13P-201ENST00000445314 798 ntBASIC17.01■□□□□ 0.31
HMGCS1Q01581 DUX4L26-201ENST00000489078 1255 ntBASIC17.01■□□□□ 0.31
HMGCS1Q01581 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGCS1Q01581 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.01■□□□□ 0.31
HMGCS1Q01581 AL390719.2-201ENST00000606993 987 ntBASIC17.01■□□□□ 0.31
HMGCS1Q01581 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGCS1Q01581 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HMGCS1Q01581 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGCS1Q01581 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HMGCS1Q01581 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.01■□□□□ 0.31
HMGCS1Q01581 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HMGCS1Q01581 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGCS1Q01581 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17■□□□□ 0.31
HMGCS1Q01581 AC099398.1-201ENST00000567919 2776 ntBASIC17■□□□□ 0.31
HMGCS1Q01581 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCS1Q01581 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
HMGCS1Q01581 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGCS1Q01581 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HMGCS1Q01581 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17■□□□□ 0.31
HMGCS1Q01581 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCS1Q01581 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HMGCS1Q01581 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCS1Q01581 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGCS1Q01581 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGCS1Q01581 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCS1Q01581 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCS1Q01581 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17■□□□□ 0.31
HMGCS1Q01581 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HMGCS1Q01581 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCS1Q01581 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGCS1Q01581 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGCS1Q01581 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17■□□□□ 0.31
HMGCS1Q01581 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17■□□□□ 0.31
HMGCS1Q01581 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17■□□□□ 0.31
HMGCS1Q01581 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HMGCS1Q01581 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCS1Q01581 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17■□□□□ 0.31
HMGCS1Q01581 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCS1Q01581 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCS1Q01581 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17■□□□□ 0.31
HMGCS1Q01581 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
HMGCS1Q01581 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGCS1Q01581 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGCS1Q01581 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS1Q01581 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS1Q01581 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 AD000864.1-201ENST00000624076 2295 ntBASIC16.99■□□□□ 0.31
HMGCS1Q01581 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms