Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.17■□□□□ 0.66
CDC42EP1Q00587 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42EP1Q00587 MIR940-201ENST00000401276 94 ntBASIC19.17■□□□□ 0.66
CDC42EP1Q00587 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CDC42EP1Q00587 KRT18P3-201ENST00000451602 1288 ntBASIC19.17■□□□□ 0.66
CDC42EP1Q00587 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.17■□□□□ 0.66
CDC42EP1Q00587 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDC42EP1Q00587 AC140113.2-201ENST00000604370 208 ntBASIC19.17■□□□□ 0.66
CDC42EP1Q00587 AC008667.4-201ENST00000607370 168 ntBASIC19.17■□□□□ 0.66
CDC42EP1Q00587 GPALPP1-207ENST00000611650 899 ntBASIC19.17■□□□□ 0.66
CDC42EP1Q00587 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42EP1Q00587 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42EP1Q00587 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
CDC42EP1Q00587 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42EP1Q00587 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42EP1Q00587 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42EP1Q00587 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42EP1Q00587 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42EP1Q00587 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 AC006504.4-201ENST00000592118 1568 ntBASIC19.16■□□□□ 0.66
CDC42EP1Q00587 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 AC108751.1-201ENST00000490852 363 ntBASIC19.16■□□□□ 0.66
CDC42EP1Q00587 RNA5SP416-201ENST00000516838 111 ntBASIC19.16■□□□□ 0.66
CDC42EP1Q00587 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 AL353135.1-201ENST00000606729 504 ntBASIC19.16■□□□□ 0.66
CDC42EP1Q00587 GGTLC5P-201ENST00000617623 998 ntBASIC19.16■□□□□ 0.66
CDC42EP1Q00587 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42EP1Q00587 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 LINC00982-205ENST00000420957 435 ntBASIC19.15■□□□□ 0.66
CDC42EP1Q00587 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 PRSS29P-201ENST00000440800 595 ntBASIC19.15■□□□□ 0.66
CDC42EP1Q00587 IGHV3-65-201ENST00000523210 341 ntBASIC19.15■□□□□ 0.66
CDC42EP1Q00587 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 AC006538.3-201ENST00000612495 578 ntBASIC19.15■□□□□ 0.66
CDC42EP1Q00587 AL805961.1-202ENST00000641562 540 ntBASIC19.15■□□□□ 0.66
CDC42EP1Q00587 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42EP1Q00587 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDC42EP1Q00587 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDC42EP1Q00587 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CDC42EP1Q00587 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDC42EP1Q00587 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDC42EP1Q00587 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDC42EP1Q00587 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDC42EP1Q00587 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.14■□□□□ 0.65
CDC42EP1Q00587 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDC42EP1Q00587 AP002414.1-201ENST00000391405 1147 ntBASIC19.14■□□□□ 0.65
CDC42EP1Q00587 KRT18P13-201ENST00000400056 1290 ntBASIC19.14■□□□□ 0.65
CDC42EP1Q00587 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.14■□□□□ 0.65
CDC42EP1Q00587 RPS15P9-201ENST00000494093 319 ntBASIC19.14■□□□□ 0.65
CDC42EP1Q00587 PGAM5P1-201ENST00000518923 814 ntBASIC19.14■□□□□ 0.65
CDC42EP1Q00587 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.14■□□□□ 0.65
CDC42EP1Q00587 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.14■□□□□ 0.65
CDC42EP1Q00587 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.14■□□□□ 0.65
CDC42EP1Q00587 AC040169.1-201ENST00000565382 521 ntBASIC19.14■□□□□ 0.65
CDC42EP1Q00587 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDC42EP1Q00587 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.14■□□□□ 0.65
CDC42EP1Q00587 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDC42EP1Q00587 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms