Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBA52P62987 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBA52P62987 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
UBA52P62987 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
UBA52P62987 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
UBA52P62987 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
UBA52P62987 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBA52P62987 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.27■□□□□ 0.04
UBA52P62987 NFIC-211ENST00000641145 8399 ntBASIC15.27■□□□□ 0.04
UBA52P62987 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBA52P62987 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA52P62987 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA52P62987 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
UBA52P62987 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA52P62987 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBA52P62987 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA52P62987 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.27■□□□□ 0.04
UBA52P62987 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBA52P62987 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA52P62987 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA52P62987 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA52P62987 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBA52P62987 STARP1-201ENST00000397973 869 ntBASIC15.27■□□□□ 0.04
UBA52P62987 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.27■□□□□ 0.04
UBA52P62987 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
UBA52P62987 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.27■□□□□ 0.04
UBA52P62987 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
UBA52P62987 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.27■□□□□ 0.04
UBA52P62987 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.27■□□□□ 0.04
UBA52P62987 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.27■□□□□ 0.04
UBA52P62987 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBA52P62987 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UBA52P62987 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBA52P62987 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBA52P62987 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
UBA52P62987 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
UBA52P62987 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBA52P62987 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UBA52P62987 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
UBA52P62987 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBA52P62987 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBA52P62987 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.27■□□□□ 0.03
UBA52P62987 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 KRT8P11-201ENST00000409686 1436 ntBASIC15.26■□□□□ 0.03
UBA52P62987 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.26■□□□□ 0.03
UBA52P62987 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
UBA52P62987 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.26■□□□□ 0.03
UBA52P62987 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
UBA52P62987 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
UBA52P62987 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.26■□□□□ 0.03
UBA52P62987 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.26■□□□□ 0.03
UBA52P62987 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.26■□□□□ 0.03
UBA52P62987 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.26■□□□□ 0.03
UBA52P62987 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.26■□□□□ 0.03
UBA52P62987 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.26■□□□□ 0.03
UBA52P62987 GCSHP2-201ENST00000560971 527 ntBASIC15.26■□□□□ 0.03
UBA52P62987 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.26■□□□□ 0.03
UBA52P62987 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.26■□□□□ 0.03
UBA52P62987 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.26■□□□□ 0.03
UBA52P62987 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 AL596257.1-201ENST00000641463 2694 ntBASIC15.26■□□□□ 0.03
UBA52P62987 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 LINC00602-201ENST00000629776 2065 ntBASIC15.26■□□□□ 0.03
UBA52P62987 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.26■□□□□ 0.03
UBA52P62987 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
UBA52P62987 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBA52P62987 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.26■□□□□ 0.03
UBA52P62987 LINC01311-201ENST00000565162 1445 ntBASIC15.26■□□□□ 0.03
UBA52P62987 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.25■□□□□ 0.03
UBA52P62987 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBA52P62987 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBA52P62987 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
UBA52P62987 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UBA52P62987 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBA52P62987 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UBA52P62987 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
UBA52P62987 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.25■□□□□ 0.03
UBA52P62987 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
UBA52P62987 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBA52P62987 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBA52P62987 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms