Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH12P55289 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH12P55289 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH12P55289 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH12P55289 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDH12P55289 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.47■□□□□ 0.23
CDH12P55289 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.47■□□□□ 0.23
CDH12P55289 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH12P55289 AC116407.2-201ENST00000613639 860 ntBASIC16.47■□□□□ 0.23
CDH12P55289 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH12P55289 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH12P55289 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH12P55289 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH12P55289 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH12P55289 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH12P55289 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH12P55289 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH12P55289 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH12P55289 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH12P55289 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
CDH12P55289 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDH12P55289 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH12P55289 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH12P55289 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH12P55289 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CDH12P55289 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDH12P55289 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH12P55289 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH12P55289 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH12P55289 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH12P55289 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH12P55289 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH12P55289 SLC25A3P1-201ENST00000443844 931 ntBASIC16.46■□□□□ 0.23
CDH12P55289 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.46■□□□□ 0.23
CDH12P55289 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH12P55289 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH12P55289 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH12P55289 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH12P55289 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CDH12P55289 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CDH12P55289 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH12P55289 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH12P55289 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH12P55289 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDH12P55289 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CDH12P55289 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDH12P55289 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDH12P55289 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH12P55289 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH12P55289 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH12P55289 REXO1L11P-201ENST00000620964 1927 ntBASIC16.45■□□□□ 0.22
CDH12P55289 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CDH12P55289 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH12P55289 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDH12P55289 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDH12P55289 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH12P55289 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH12P55289 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH12P55289 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH12P55289 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDH12P55289 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH12P55289 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH12P55289 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CDH12P55289 AL023973.1-201ENST00000624619 620 ntBASIC16.45■□□□□ 0.22
CDH12P55289 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH12P55289 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CDH12P55289 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDH12P55289 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDH12P55289 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH12P55289 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH12P55289 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH12P55289 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH12P55289 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH12P55289 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH12P55289 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH12P55289 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH12P55289 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH12P55289 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH12P55289 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH12P55289 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH12P55289 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH12P55289 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH12P55289 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH12P55289 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH12P55289 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH12P55289 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.44■□□□□ 0.22
CDH12P55289 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH12P55289 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH12P55289 AC034232.1-201ENST00000506026 1064 ntBASIC16.44■□□□□ 0.22
CDH12P55289 AC010203.1-204ENST00000548782 407 ntBASIC16.44■□□□□ 0.22
CDH12P55289 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH12P55289 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH12P55289 LINC01451-201ENST00000623792 534 ntBASIC16.44■□□□□ 0.22
CDH12P55289 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH12P55289 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH12P55289 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CDH12P55289 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CDH12P55289 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDH12P55289 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH12P55289 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms