Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PSMD4P55036 AC016734.2-201ENST00000624325 1377 ntBASIC16.46■□□□□ 0.23
PSMD4P55036 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PSMD4P55036 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 AC067852.2-201ENST00000590513 2313 ntBASIC16.46■□□□□ 0.23
PSMD4P55036 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.46■□□□□ 0.22
PSMD4P55036 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.46■□□□□ 0.22
PSMD4P55036 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PSMD4P55036 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PSMD4P55036 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PSMD4P55036 KRT18P1-202ENST00000452408 1331 ntBASIC16.45■□□□□ 0.22
PSMD4P55036 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PSMD4P55036 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.45■□□□□ 0.22
PSMD4P55036 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.45■□□□□ 0.22
PSMD4P55036 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PSMD4P55036 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PSMD4P55036 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.45■□□□□ 0.22
PSMD4P55036 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.45■□□□□ 0.22
PSMD4P55036 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
PSMD4P55036 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PSMD4P55036 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.45■□□□□ 0.22
PSMD4P55036 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.45■□□□□ 0.22
PSMD4P55036 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PSMD4P55036 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.45■□□□□ 0.22
PSMD4P55036 BX276092.7-203ENST00000637198 1536 ntBASIC16.45■□□□□ 0.22
PSMD4P55036 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.45■□□□□ 0.22
PSMD4P55036 AC097374.2-201ENST00000618617 1306 ntBASIC16.45■□□□□ 0.22
PSMD4P55036 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.44■□□□□ 0.22
PSMD4P55036 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 KRT8P47-201ENST00000604727 1398 ntBASIC16.44■□□□□ 0.22
PSMD4P55036 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PSMD4P55036 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.44■□□□□ 0.22
PSMD4P55036 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.44■□□□□ 0.22
PSMD4P55036 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.44■□□□□ 0.22
PSMD4P55036 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.44■□□□□ 0.22
PSMD4P55036 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PSMD4P55036 Z69720.1-201ENST00000601483 472 ntBASIC16.44■□□□□ 0.22
PSMD4P55036 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.44■□□□□ 0.22
PSMD4P55036 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PSMD4P55036 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.44■□□□□ 0.22
PSMD4P55036 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.44■□□□□ 0.22
PSMD4P55036 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PSMD4P55036 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
PSMD4P55036 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PSMD4P55036 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PSMD4P55036 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.43■□□□□ 0.22
PSMD4P55036 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PSMD4P55036 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PSMD4P55036 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PSMD4P55036 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PSMD4P55036 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.43■□□□□ 0.22
PSMD4P55036 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.43■□□□□ 0.22
PSMD4P55036 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PSMD4P55036 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PSMD4P55036 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.43■□□□□ 0.22
PSMD4P55036 AL353801.3-201ENST00000609898 542 ntBASIC16.43■□□□□ 0.22
PSMD4P55036 LINC01451-201ENST00000623792 534 ntBASIC16.43■□□□□ 0.22
PSMD4P55036 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms