Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA2D1P54289 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA2D1P54289 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.71■□□□□ 0.59
CACNA2D1P54289 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CACNA2D1P54289 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CACNA2D1P54289 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CACNA2D1P54289 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA2D1P54289 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.7■□□□□ 0.58
CACNA2D1P54289 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA2D1P54289 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA2D1P54289 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CACNA2D1P54289 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA2D1P54289 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA2D1P54289 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA2D1P54289 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
CACNA2D1P54289 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA2D1P54289 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA2D1P54289 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA2D1P54289 COX5BP2-201ENST00000392354 334 ntBASIC18.7■□□□□ 0.58
CACNA2D1P54289 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.7■□□□□ 0.58
CACNA2D1P54289 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA2D1P54289 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CACNA2D1P54289 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.7■□□□□ 0.58
CACNA2D1P54289 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA2D1P54289 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.7■□□□□ 0.58
CACNA2D1P54289 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.7■□□□□ 0.58
CACNA2D1P54289 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA2D1P54289 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CACNA2D1P54289 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.7■□□□□ 0.58
CACNA2D1P54289 AP005117.1-201ENST00000584346 1413 ntBASIC18.7■□□□□ 0.58
CACNA2D1P54289 SLC25A6P4-201ENST00000586535 553 ntBASIC18.7■□□□□ 0.58
CACNA2D1P54289 MTDHP3-201ENST00000594186 672 ntBASIC18.7■□□□□ 0.58
CACNA2D1P54289 AL355877.3-201ENST00000622820 899 ntBASIC18.7■□□□□ 0.58
CACNA2D1P54289 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.7■□□□□ 0.58
CACNA2D1P54289 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CACNA2D1P54289 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA2D1P54289 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.7■□□□□ 0.58
CACNA2D1P54289 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA2D1P54289 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CACNA2D1P54289 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CACNA2D1P54289 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA2D1P54289 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA2D1P54289 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNA2D1P54289 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CACNA2D1P54289 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA2D1P54289 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CACNA2D1P54289 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA2D1P54289 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA2D1P54289 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNA2D1P54289 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNA2D1P54289 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA2D1P54289 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNA2D1P54289 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.69■□□□□ 0.58
CACNA2D1P54289 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNA2D1P54289 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.69■□□□□ 0.58
CACNA2D1P54289 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
CACNA2D1P54289 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA2D1P54289 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.69■□□□□ 0.58
CACNA2D1P54289 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA2D1P54289 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNA2D1P54289 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA2D1P54289 AC099398.1-201ENST00000567919 2776 ntBASIC18.69■□□□□ 0.58
CACNA2D1P54289 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA2D1P54289 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.69■□□□□ 0.58
CACNA2D1P54289 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNA2D1P54289 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CACNA2D1P54289 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CACNA2D1P54289 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA2D1P54289 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA2D1P54289 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA2D1P54289 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA2D1P54289 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA2D1P54289 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA2D1P54289 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CACNA2D1P54289 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CACNA2D1P54289 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNA2D1P54289 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.68■□□□□ 0.58
CACNA2D1P54289 AC122714.2-201ENST00000502787 707 ntBASIC18.68■□□□□ 0.58
CACNA2D1P54289 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA2D1P54289 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNA2D1P54289 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CACNA2D1P54289 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.68■□□□□ 0.58
CACNA2D1P54289 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNA2D1P54289 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNA2D1P54289 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CACNA2D1P54289 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNA2D1P54289 AC148477.8-201ENST00000624298 468 ntBASIC18.68■□□□□ 0.58
CACNA2D1P54289 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNA2D1P54289 AP000867.4-201ENST00000641616 219 ntBASIC18.68■□□□□ 0.58
CACNA2D1P54289 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNA2D1P54289 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA2D1P54289 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA2D1P54289 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA2D1P54289 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA2D1P54289 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA2D1P54289 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA2D1P54289 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.68■□□□□ 0.58
CACNA2D1P54289 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CACNA2D1P54289 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CACNA2D1P54289 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms