Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AL158211.3-201ENST00000607385 239 ntBASIC31.24■■■□□ 2.59
SMARCA4P51532 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC31.24■■■□□ 2.59
SMARCA4P51532 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC31.24■■■□□ 2.59
SMARCA4P51532 TUBB3P1-201ENST00000405796 1332 ntBASIC31.24■■■□□ 2.59
SMARCA4P51532 AKAP8P1-201ENST00000434743 1349 ntBASIC31.24■■■□□ 2.59
SMARCA4P51532 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC31.24■■■□□ 2.59
SMARCA4P51532 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCA4P51532 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC31.24■■■□□ 2.59
SMARCA4P51532 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC31.24■■■□□ 2.59
SMARCA4P51532 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC31.24■■■□□ 2.59
SMARCA4P51532 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
SMARCA4P51532 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
SMARCA4P51532 TSPY16P-201ENST00000449843 468 ntBASIC31.24■■■□□ 2.59
SMARCA4P51532 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC31.24■■■□□ 2.59
SMARCA4P51532 AL390754.1-201ENST00000619088 582 ntBASIC31.24■■■□□ 2.59
SMARCA4P51532 AL645728.2-201ENST00000641974 660 ntBASIC31.24■■■□□ 2.59
SMARCA4P51532 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA4P51532 FO538757.1-201ENST00000623083 1397 ntBASIC31.23■■■□□ 2.59
SMARCA4P51532 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC31.23■■■□□ 2.59
SMARCA4P51532 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC31.23■■■□□ 2.59
SMARCA4P51532 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA4P51532 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC31.23■■■□□ 2.59
SMARCA4P51532 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA4P51532 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA4P51532 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA4P51532 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA4P51532 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC31.23■■■□□ 2.59
SMARCA4P51532 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA4P51532 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
SMARCA4P51532 AC084121.4-201ENST00000641598 221 ntBASIC31.23■■■□□ 2.59
SMARCA4P51532 AF228730.8-201ENST00000642140 221 ntBASIC31.23■■■□□ 2.59
SMARCA4P51532 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC31.23■■■□□ 2.59
SMARCA4P51532 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC31.23■■■□□ 2.59
SMARCA4P51532 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCA4P51532 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA4P51532 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
SMARCA4P51532 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
SMARCA4P51532 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA4P51532 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC31.22■■■□□ 2.59
SMARCA4P51532 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA4P51532 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA4P51532 AC005237.2-201ENST00000434368 219 ntBASIC31.22■■■□□ 2.59
SMARCA4P51532 CRB3P1-201ENST00000449338 276 ntBASIC31.22■■■□□ 2.59
SMARCA4P51532 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC31.22■■■□□ 2.59
SMARCA4P51532 RAB34-224ENST00000636513 888 ntTSL 5 BASIC31.22■■■□□ 2.59
SMARCA4P51532 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA4P51532 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC31.22■■■□□ 2.59
SMARCA4P51532 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA4P51532 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC31.22■■■□□ 2.59
SMARCA4P51532 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA4P51532 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA4P51532 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMARCA4P51532 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMARCA4P51532 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC31.21■■■□□ 2.59
SMARCA4P51532 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC31.21■■■□□ 2.59
SMARCA4P51532 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMARCA4P51532 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC31.21■■■□□ 2.59
SMARCA4P51532 MMP17-203ENST00000535004 719 ntTSL 3 BASIC31.21■■■□□ 2.59
SMARCA4P51532 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
SMARCA4P51532 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SMARCA4P51532 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC31.21■■■□□ 2.59
SMARCA4P51532 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC31.21■■■□□ 2.59
SMARCA4P51532 CD81-202ENST00000381036 880 ntTSL 3 BASIC31.2■■■□□ 2.59
SMARCA4P51532 MIR943-201ENST00000401286 94 ntBASIC31.2■■■□□ 2.59
SMARCA4P51532 BASP1P1-201ENST00000430708 665 ntBASIC31.2■■■□□ 2.59
SMARCA4P51532 SPCS2P4-201ENST00000436160 681 ntBASIC31.2■■■□□ 2.59
SMARCA4P51532 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC31.2■■■□□ 2.59
SMARCA4P51532 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SMARCA4P51532 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC31.2■■■□□ 2.59
SMARCA4P51532 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SMARCA4P51532 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SMARCA4P51532 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
SMARCA4P51532 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC31.2■■■□□ 2.59
SMARCA4P51532 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC31.2■■■□□ 2.59
SMARCA4P51532 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC31.2■■■□□ 2.59
SMARCA4P51532 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC31.2■■■□□ 2.59
SMARCA4P51532 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.58
SMARCA4P51532 SLC25A39P2-201ENST00000537614 270 ntBASIC31.2■■■□□ 2.58
SMARCA4P51532 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC31.2■■■□□ 2.58
SMARCA4P51532 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.58
SMARCA4P51532 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC31.2■■■□□ 2.58
SMARCA4P51532 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC31.2■■■□□ 2.58
SMARCA4P51532 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SMARCA4P51532 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC31.2■■■□□ 2.58
SMARCA4P51532 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC31.2■■■□□ 2.58
SMARCA4P51532 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
SMARCA4P51532 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SMARCA4P51532 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC31.19■■■□□ 2.58
SMARCA4P51532 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
SMARCA4P51532 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC31.19■■■□□ 2.58
SMARCA4P51532 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC31.19■■■□□ 2.58
SMARCA4P51532 AC092580.3-201ENST00000430932 139 ntBASIC31.19■■■□□ 2.58
SMARCA4P51532 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC31.19■■■□□ 2.58
SMARCA4P51532 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC31.18■■■□□ 2.58
SMARCA4P51532 AMT-250ENST00000637682 1823 ntTSL 5 BASIC31.18■■■□□ 2.58
SMARCA4P51532 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC31.18■■■□□ 2.58
SMARCA4P51532 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SMARCA4P51532 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC31.18■■■□□ 2.58
SMARCA4P51532 DUX4L17-201ENST00000557360 1267 ntBASIC31.18■■■□□ 2.58
SMARCA4P51532 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC31.18■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms