Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
SRP9P49458 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SRP9P49458 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SRP9P49458 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SRP9P49458 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP9P49458 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SRP9P49458 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRP9P49458 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP9P49458 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP9P49458 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRP9P49458 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP9P49458 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.7■□□□□ 0.1
SRP9P49458 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP9P49458 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SRP9P49458 PHGDH-209ENST00000641074 1780 ntBASIC15.7■□□□□ 0.1
SRP9P49458 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP9P49458 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.7■□□□□ 0.1
SRP9P49458 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP9P49458 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SRP9P49458 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.7■□□□□ 0.1
SRP9P49458 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRP9P49458 TSPY5P-201ENST00000426936 936 ntBASIC15.7■□□□□ 0.1
SRP9P49458 HOMER2P1-201ENST00000455653 964 ntBASIC15.7■□□□□ 0.1
SRP9P49458 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.7■□□□□ 0.1
SRP9P49458 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.7■□□□□ 0.1
SRP9P49458 GCSHP2-201ENST00000560971 527 ntBASIC15.7■□□□□ 0.1
SRP9P49458 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.7■□□□□ 0.1
SRP9P49458 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SRP9P49458 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
SRP9P49458 AC011558.1-201ENST00000623459 338 ntBASIC15.7■□□□□ 0.1
SRP9P49458 AL162727.3-201ENST00000635661 2787 ntBASIC15.7■□□□□ 0.1
SRP9P49458 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.7■□□□□ 0.1
SRP9P49458 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP9P49458 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SRP9P49458 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP9P49458 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRP9P49458 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP9P49458 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRP9P49458 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SRP9P49458 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SRP9P49458 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.69■□□□□ 0.1
SRP9P49458 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.69■□□□□ 0.1
SRP9P49458 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 KRT8P50-201ENST00000562022 1438 ntBASIC15.69■□□□□ 0.1
SRP9P49458 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
SRP9P49458 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.69■□□□□ 0.1
SRP9P49458 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SRP9P49458 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SRP9P49458 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.69■□□□□ 0.1
SRP9P49458 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SRP9P49458 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.69■□□□□ 0.1
SRP9P49458 SEC1P-202ENST00000473944 940 ntBASIC15.69■□□□□ 0.1
SRP9P49458 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.69■□□□□ 0.1
SRP9P49458 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.69■□□□□ 0.1
SRP9P49458 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.69■□□□□ 0.1
SRP9P49458 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SRP9P49458 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 AC010240.3-201ENST00000607688 395 ntBASIC15.69■□□□□ 0.1
SRP9P49458 AC006011.2-201ENST00000621313 1158 ntBASIC15.69■□□□□ 0.1
SRP9P49458 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.69■□□□□ 0.1
SRP9P49458 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SRP9P49458 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SRP9P49458 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.69■□□□□ 0.1
SRP9P49458 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
SRP9P49458 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.69■□□□□ 0.1
SRP9P49458 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.69■□□□□ 0.1
SRP9P49458 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP9P49458 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SRP9P49458 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.68■□□□□ 0.1
SRP9P49458 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SRP9P49458 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
SRP9P49458 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SRP9P49458 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SRP9P49458 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
SRP9P49458 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.68■□□□□ 0.1
SRP9P49458 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms