Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A3P43003 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A3P43003 AL031133.1-201ENST00000406807 723 ntBASIC16.25■□□□□ 0.19
SLC1A3P43003 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SLC1A3P43003 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SLC1A3P43003 MTCL1P1-201ENST00000446207 792 ntBASIC16.25■□□□□ 0.19
SLC1A3P43003 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A3P43003 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC1A3P43003 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC1A3P43003 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC1A3P43003 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC1A3P43003 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SLC1A3P43003 AL121956.5-201ENST00000625261 221 ntBASIC16.25■□□□□ 0.19
SLC1A3P43003 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A3P43003 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A3P43003 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A3P43003 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A3P43003 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A3P43003 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A3P43003 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SLC1A3P43003 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SLC1A3P43003 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SLC1A3P43003 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A3P43003 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC1A3P43003 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SLC1A3P43003 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
SLC1A3P43003 AC009949.1-201ENST00000623048 1830 ntBASIC16.24■□□□□ 0.19
SLC1A3P43003 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC1A3P43003 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC1A3P43003 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SLC1A3P43003 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC1A3P43003 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 TSPY22P-201ENST00000427496 604 ntBASIC16.24■□□□□ 0.19
SLC1A3P43003 DDX43P3-201ENST00000441064 443 ntBASIC16.24■□□□□ 0.19
SLC1A3P43003 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC1A3P43003 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC1A3P43003 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC1A3P43003 NTF6B-201ENST00000591913 560 ntBASIC16.24■□□□□ 0.19
SLC1A3P43003 AC011498.5-201ENST00000592027 486 ntBASIC16.24■□□□□ 0.19
SLC1A3P43003 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC1A3P43003 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC1A3P43003 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A3P43003 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC1A3P43003 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SLC1A3P43003 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC1A3P43003 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SLC1A3P43003 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC1A3P43003 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SLC1A3P43003 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC1A3P43003 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC1A3P43003 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC1A3P43003 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 GUSBP12-201ENST00000513727 720 ntBASIC16.23■□□□□ 0.19
SLC1A3P43003 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SLC1A3P43003 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC1A3P43003 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SLC1A3P43003 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC1A3P43003 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC1A3P43003 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC1A3P43003 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC1A3P43003 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A3P43003 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms