Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AL121761.2-201ENST00000598007 1648 ntBASIC18.67■□□□□ 0.58
CTNNA1P35221 AL391807.1-203ENST00000604392 2365 ntBASIC18.67■□□□□ 0.58
CTNNA1P35221 OR6D1P-203ENST00000641209 4860 ntBASIC18.67■□□□□ 0.58
CTNNA1P35221 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.66■□□□□ 0.58
CTNNA1P35221 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CTNNA1P35221 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.66■□□□□ 0.58
CTNNA1P35221 CROCCP1-201ENST00000426910 5675 ntBASIC18.66■□□□□ 0.58
CTNNA1P35221 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNA1P35221 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CTNNA1P35221 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNA1P35221 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNA1P35221 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.66■□□□□ 0.58
CTNNA1P35221 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.66■□□□□ 0.58
CTNNA1P35221 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNA1P35221 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.66■□□□□ 0.58
CTNNA1P35221 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.66■□□□□ 0.58
CTNNA1P35221 AL023973.1-201ENST00000624619 620 ntBASIC18.66■□□□□ 0.58
CTNNA1P35221 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.66■□□□□ 0.58
CTNNA1P35221 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNA1P35221 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.66■□□□□ 0.58
CTNNA1P35221 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.66■□□□□ 0.58
CTNNA1P35221 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNA1P35221 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNA1P35221 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNA1P35221 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNA1P35221 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNA1P35221 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CTNNA1P35221 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNA1P35221 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNA1P35221 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.65■□□□□ 0.58
CTNNA1P35221 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNA1P35221 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNA1P35221 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CTNNA1P35221 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNA1P35221 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CTNNA1P35221 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNA1P35221 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.65■□□□□ 0.58
CTNNA1P35221 AL596275.1-201ENST00000423464 877 ntBASIC18.65■□□□□ 0.58
CTNNA1P35221 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.65■□□□□ 0.58
CTNNA1P35221 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.65■□□□□ 0.58
CTNNA1P35221 AL136038.4-201ENST00000603606 1261 ntBASIC18.65■□□□□ 0.58
CTNNA1P35221 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.65■□□□□ 0.58
CTNNA1P35221 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.65■□□□□ 0.58
CTNNA1P35221 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CTNNA1P35221 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNA1P35221 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.65■□□□□ 0.58
CTNNA1P35221 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNA1P35221 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNA1P35221 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.65■□□□□ 0.58
CTNNA1P35221 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNA1P35221 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNA1P35221 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNA1P35221 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNA1P35221 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CTNNA1P35221 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
CTNNA1P35221 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.64■□□□□ 0.58
CTNNA1P35221 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTNNA1P35221 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CTNNA1P35221 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CTNNA1P35221 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.64■□□□□ 0.57
CTNNA1P35221 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 SLC25A3P1-201ENST00000443844 931 ntBASIC18.64■□□□□ 0.57
CTNNA1P35221 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.64■□□□□ 0.57
CTNNA1P35221 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CTNNA1P35221 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CTNNA1P35221 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CTNNA1P35221 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CTNNA1P35221 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CTNNA1P35221 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
CTNNA1P35221 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNA1P35221 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.63■□□□□ 0.57
CTNNA1P35221 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CTNNA1P35221 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNNA1P35221 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNNA1P35221 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNNA1P35221 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.63■□□□□ 0.57
CTNNA1P35221 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTNNA1P35221 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CTNNA1P35221 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.63■□□□□ 0.57
CTNNA1P35221 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CTNNA1P35221 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTNNA1P35221 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.63■□□□□ 0.57
CTNNA1P35221 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms