Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SLC6A4P31645 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC6A4P31645 KLF4P1-201ENST00000412782 1185 ntBASIC18.09■□□□□ 0.49
SLC6A4P31645 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SLC6A4P31645 FAM215A-202ENST00000632077 792 ntBASIC18.09■□□□□ 0.49
SLC6A4P31645 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A4P31645 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SLC6A4P31645 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC6A4P31645 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC6A4P31645 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.08■□□□□ 0.49
SLC6A4P31645 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC6A4P31645 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SLC6A4P31645 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLC6A4P31645 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
SLC6A4P31645 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC6A4P31645 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SLC6A4P31645 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC6A4P31645 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
SLC6A4P31645 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC6A4P31645 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC6A4P31645 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC6A4P31645 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC6A4P31645 IGHV3-52-201ENST00000519770 353 ntBASIC18.08■□□□□ 0.48
SLC6A4P31645 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC6A4P31645 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC6A4P31645 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC6A4P31645 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.08■□□□□ 0.48
SLC6A4P31645 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC6A4P31645 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SLC6A4P31645 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC6A4P31645 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC6A4P31645 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC6A4P31645 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC6A4P31645 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC6A4P31645 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC6A4P31645 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC6A4P31645 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.08■□□□□ 0.48
SLC6A4P31645 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC6A4P31645 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC6A4P31645 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC6A4P31645 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC6A4P31645 AC243591.1-201ENST00000452967 1364 ntBASIC18.07■□□□□ 0.48
SLC6A4P31645 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A4P31645 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC6A4P31645 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC6A4P31645 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.07■□□□□ 0.48
SLC6A4P31645 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A4P31645 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A4P31645 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A4P31645 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A4P31645 AC003669.1-201ENST00000334569 611 ntBASIC18.07■□□□□ 0.48
SLC6A4P31645 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC6A4P31645 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.07■□□□□ 0.48
SLC6A4P31645 AL020989.1-201ENST00000422979 469 ntBASIC18.07■□□□□ 0.48
SLC6A4P31645 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.07■□□□□ 0.48
SLC6A4P31645 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC6A4P31645 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.07■□□□□ 0.48
SLC6A4P31645 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.07■□□□□ 0.48
SLC6A4P31645 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.07■□□□□ 0.48
SLC6A4P31645 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC6A4P31645 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.07■□□□□ 0.48
SLC6A4P31645 AL022326.1-202ENST00000641533 845 ntBASIC18.07■□□□□ 0.48
SLC6A4P31645 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SLC6A4P31645 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A4P31645 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A4P31645 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC6A4P31645 LINC00304-203ENST00000565008 1864 ntBASIC18.07■□□□□ 0.48
SLC6A4P31645 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A4P31645 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SLC6A4P31645 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC6A4P31645 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A4P31645 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A4P31645 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A4P31645 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A4P31645 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SLC6A4P31645 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A4P31645 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC6A4P31645 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SLC6A4P31645 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A4P31645 AC018470.1-201ENST00000624790 3129 ntBASIC18.06■□□□□ 0.48
SLC6A4P31645 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SLC6A4P31645 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A4P31645 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SLC6A4P31645 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SLC6A4P31645 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A4P31645 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A4P31645 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A4P31645 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A4P31645 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A4P31645 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A4P31645 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SLC6A4P31645 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SLC6A4P31645 AP000347.1-202ENST00000435868 847 ntBASIC18.06■□□□□ 0.48
SLC6A4P31645 AC012640.2-201ENST00000561606 901 ntBASIC18.06■□□□□ 0.48
SLC6A4P31645 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC6A4P31645 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC6A4P31645 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC6A4P31645 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC6A4P31645 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC6A4P31645 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms