Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MSR1P21757 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MSR1P21757 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
MSR1P21757 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.61■□□□□ 0.09
MSR1P21757 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MSR1P21757 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
MSR1P21757 AC096633.1-201ENST00000422446 749 ntBASIC15.61■□□□□ 0.09
MSR1P21757 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
MSR1P21757 RN7SL606P-201ENST00000472779 293 ntBASIC15.61■□□□□ 0.09
MSR1P21757 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MSR1P21757 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MSR1P21757 AL121672.3-201ENST00000608644 468 ntBASIC15.61■□□□□ 0.09
MSR1P21757 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MSR1P21757 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
MSR1P21757 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.61■□□□□ 0.09
MSR1P21757 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MSR1P21757 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
MSR1P21757 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.61■□□□□ 0.09
MSR1P21757 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.61■□□□□ 0.09
MSR1P21757 AL138688.1-201ENST00000624851 1594 ntBASIC15.61■□□□□ 0.09
MSR1P21757 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
MSR1P21757 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MSR1P21757 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
MSR1P21757 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MSR1P21757 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
MSR1P21757 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.6■□□□□ 0.09
MSR1P21757 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
MSR1P21757 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.6■□□□□ 0.09
MSR1P21757 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
MSR1P21757 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
MSR1P21757 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
MSR1P21757 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
MSR1P21757 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
MSR1P21757 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.6■□□□□ 0.09
MSR1P21757 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.6■□□□□ 0.09
MSR1P21757 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.6■□□□□ 0.09
MSR1P21757 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 BX276092.5-203ENST00000456199 560 ntBASIC15.6■□□□□ 0.09
MSR1P21757 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.6■□□□□ 0.09
MSR1P21757 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.6■□□□□ 0.09
MSR1P21757 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.6■□□□□ 0.09
MSR1P21757 FAM86EP-206ENST00000510506 987 ntBASIC15.6■□□□□ 0.09
MSR1P21757 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.6■□□□□ 0.09
MSR1P21757 AC011840.4-201ENST00000578471 627 ntBASIC15.6■□□□□ 0.09
MSR1P21757 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
MSR1P21757 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.6■□□□□ 0.09
MSR1P21757 AC097374.2-201ENST00000618617 1306 ntBASIC15.6■□□□□ 0.09
MSR1P21757 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.6■□□□□ 0.09
MSR1P21757 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.6■□□□□ 0.09
MSR1P21757 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
MSR1P21757 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.6■□□□□ 0.09
MSR1P21757 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.59■□□□□ 0.09
MSR1P21757 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.59■□□□□ 0.09
MSR1P21757 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.59■□□□□ 0.09
MSR1P21757 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.59■□□□□ 0.09
MSR1P21757 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MSR1P21757 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
MSR1P21757 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.59■□□□□ 0.09
MSR1P21757 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
MSR1P21757 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MSR1P21757 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MSR1P21757 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
MSR1P21757 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MSR1P21757 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MSR1P21757 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MSR1P21757 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.59■□□□□ 0.09
MSR1P21757 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.59■□□□□ 0.09
MSR1P21757 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.59■□□□□ 0.09
MSR1P21757 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.59■□□□□ 0.09
MSR1P21757 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.59■□□□□ 0.09
MSR1P21757 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.59■□□□□ 0.09
MSR1P21757 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.59■□□□□ 0.09
MSR1P21757 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.59■□□□□ 0.09
MSR1P21757 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.59■□□□□ 0.09
MSR1P21757 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MSR1P21757 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MSR1P21757 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MSR1P21757 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
MSR1P21757 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MSR1P21757 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MSR1P21757 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MSR1P21757 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms