Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRAFP15056 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRAFP15056 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRAFP15056 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.18■□□□□ 0.5
BRAFP15056 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BRAFP15056 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRAFP15056 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.18■□□□□ 0.5
BRAFP15056 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
BRAFP15056 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRAFP15056 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.18■□□□□ 0.5
BRAFP15056 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.18■□□□□ 0.5
BRAFP15056 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
BRAFP15056 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRAFP15056 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
BRAFP15056 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
BRAFP15056 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRAFP15056 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BRAFP15056 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRAFP15056 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
BRAFP15056 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.17■□□□□ 0.5
BRAFP15056 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.17■□□□□ 0.5
BRAFP15056 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.17■□□□□ 0.5
BRAFP15056 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.17■□□□□ 0.5
BRAFP15056 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BRAFP15056 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.17■□□□□ 0.5
BRAFP15056 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.17■□□□□ 0.5
BRAFP15056 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BRAFP15056 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.17■□□□□ 0.5
BRAFP15056 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BRAFP15056 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRAFP15056 AC018695.7-201ENST00000624587 2492 ntBASIC18.17■□□□□ 0.5
BRAFP15056 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.17■□□□□ 0.5
BRAFP15056 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.17■□□□□ 0.5
BRAFP15056 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRAFP15056 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRAFP15056 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
BRAFP15056 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.17■□□□□ 0.5
BRAFP15056 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.16■□□□□ 0.5
BRAFP15056 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BRAFP15056 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRAFP15056 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
BRAFP15056 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.16■□□□□ 0.5
BRAFP15056 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRAFP15056 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.16■□□□□ 0.5
BRAFP15056 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
BRAFP15056 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRAFP15056 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRAFP15056 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BRAFP15056 AC112907.2-201ENST00000448639 330 ntBASIC18.16■□□□□ 0.5
BRAFP15056 AL671277.2-201ENST00000458060 996 ntBASIC18.16■□□□□ 0.5
BRAFP15056 RASA4DP-201ENST00000460726 1199 ntBASIC18.16■□□□□ 0.5
BRAFP15056 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.16■□□□□ 0.5
BRAFP15056 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.16■□□□□ 0.5
BRAFP15056 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
BRAFP15056 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
BRAFP15056 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRAFP15056 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRAFP15056 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRAFP15056 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRAFP15056 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BRAFP15056 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRAFP15056 LINC01126-201ENST00000623515 1646 ntBASIC18.16■□□□□ 0.5
BRAFP15056 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRAFP15056 KRT8P7-201ENST00000533003 1432 ntBASIC18.15■□□□□ 0.5
BRAFP15056 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
BRAFP15056 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
BRAFP15056 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRAFP15056 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
BRAFP15056 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
BRAFP15056 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRAFP15056 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRAFP15056 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRAFP15056 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.15■□□□□ 0.5
BRAFP15056 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRAFP15056 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRAFP15056 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
BRAFP15056 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRAFP15056 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.15■□□□□ 0.5
BRAFP15056 AC104390.1-201ENST00000555663 520 ntBASIC18.15■□□□□ 0.5
BRAFP15056 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
BRAFP15056 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRAFP15056 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
BRAFP15056 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
BRAFP15056 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.15■□□□□ 0.5
BRAFP15056 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRAFP15056 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRAFP15056 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.15■□□□□ 0.5
BRAFP15056 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRAFP15056 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRAFP15056 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
BRAFP15056 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.14■□□□□ 0.5
BRAFP15056 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRAFP15056 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.14■□□□□ 0.49
BRAFP15056 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
BRAFP15056 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.14■□□□□ 0.49
BRAFP15056 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRAFP15056 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.14■□□□□ 0.49
BRAFP15056 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
BRAFP15056 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
BRAFP15056 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms