Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
DEFA4P12838 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.39□□□□□ -0.11
DEFA4P12838 ATP5G1P1-201ENST00000448724 379 ntBASIC14.39□□□□□ -0.11
DEFA4P12838 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.39□□□□□ -0.11
DEFA4P12838 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.39□□□□□ -0.11
DEFA4P12838 NEK4P2-201ENST00000580004 1012 ntBASIC14.39□□□□□ -0.11
DEFA4P12838 AC008687.5-201ENST00000593746 558 ntBASIC14.39□□□□□ -0.11
DEFA4P12838 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
DEFA4P12838 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
DEFA4P12838 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.39□□□□□ -0.11
DEFA4P12838 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.39□□□□□ -0.11
DEFA4P12838 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
DEFA4P12838 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.39□□□□□ -0.11
DEFA4P12838 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.39□□□□□ -0.11
DEFA4P12838 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.39□□□□□ -0.11
DEFA4P12838 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
DEFA4P12838 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
DEFA4P12838 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 AP001094.4-201ENST00000579008 2176 ntBASIC14.39□□□□□ -0.11
DEFA4P12838 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.39□□□□□ -0.11
DEFA4P12838 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
DEFA4P12838 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.38□□□□□ -0.11
DEFA4P12838 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
DEFA4P12838 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
DEFA4P12838 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.38□□□□□ -0.11
DEFA4P12838 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
DEFA4P12838 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
DEFA4P12838 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.38□□□□□ -0.11
DEFA4P12838 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.38□□□□□ -0.11
DEFA4P12838 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
DEFA4P12838 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
DEFA4P12838 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
DEFA4P12838 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.38□□□□□ -0.11
DEFA4P12838 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.38□□□□□ -0.11
DEFA4P12838 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.38□□□□□ -0.11
DEFA4P12838 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.38□□□□□ -0.11
DEFA4P12838 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.38□□□□□ -0.11
DEFA4P12838 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 FAM87A-204ENST00000613235 858 ntBASIC14.38□□□□□ -0.11
DEFA4P12838 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
DEFA4P12838 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 AC006116.8-202ENST00000587620 1550 ntBASIC14.38□□□□□ -0.11
DEFA4P12838 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.38□□□□□ -0.11
DEFA4P12838 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
DEFA4P12838 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.38□□□□□ -0.11
DEFA4P12838 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
DEFA4P12838 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEFA4P12838 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DEFA4P12838 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.37□□□□□ -0.11
DEFA4P12838 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.37□□□□□ -0.11
DEFA4P12838 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DEFA4P12838 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEFA4P12838 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.37□□□□□ -0.11
DEFA4P12838 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
DEFA4P12838 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEFA4P12838 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
DEFA4P12838 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEFA4P12838 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
DEFA4P12838 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEFA4P12838 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEFA4P12838 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEFA4P12838 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEFA4P12838 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEFA4P12838 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
DEFA4P12838 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms