Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC005332.1-201ENST00000577698 1310 ntBASIC16.37■□□□□ 0.21
UBL4AP11441 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
UBL4AP11441 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
UBL4AP11441 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBL4AP11441 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBL4AP11441 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBL4AP11441 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
UBL4AP11441 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.36■□□□□ 0.21
UBL4AP11441 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.36■□□□□ 0.21
UBL4AP11441 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL4AP11441 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL4AP11441 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL4AP11441 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL4AP11441 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.36■□□□□ 0.21
UBL4AP11441 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.36■□□□□ 0.21
UBL4AP11441 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
UBL4AP11441 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
UBL4AP11441 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.36■□□□□ 0.21
UBL4AP11441 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL4AP11441 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBL4AP11441 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL4AP11441 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
UBL4AP11441 AC068472.1-201ENST00000474589 881 ntBASIC16.36■□□□□ 0.21
UBL4AP11441 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.36■□□□□ 0.21
UBL4AP11441 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.36■□□□□ 0.21
UBL4AP11441 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.36■□□□□ 0.21
UBL4AP11441 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.36■□□□□ 0.21
UBL4AP11441 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.36■□□□□ 0.21
UBL4AP11441 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.36■□□□□ 0.21
UBL4AP11441 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.36■□□□□ 0.21
UBL4AP11441 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
UBL4AP11441 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
UBL4AP11441 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL4AP11441 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBL4AP11441 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.36■□□□□ 0.21
UBL4AP11441 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.36■□□□□ 0.21
UBL4AP11441 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBL4AP11441 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL4AP11441 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL4AP11441 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.35■□□□□ 0.21
UBL4AP11441 AC009949.1-201ENST00000623048 1830 ntBASIC16.35■□□□□ 0.21
UBL4AP11441 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
UBL4AP11441 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
UBL4AP11441 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
UBL4AP11441 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
UBL4AP11441 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.35■□□□□ 0.21
UBL4AP11441 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.35■□□□□ 0.21
UBL4AP11441 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.35■□□□□ 0.21
UBL4AP11441 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.35■□□□□ 0.21
UBL4AP11441 FAM86EP-206ENST00000510506 987 ntBASIC16.35■□□□□ 0.21
UBL4AP11441 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 KRT8P26-201ENST00000534154 1276 ntBASIC16.35■□□□□ 0.21
UBL4AP11441 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.35■□□□□ 0.21
UBL4AP11441 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.35■□□□□ 0.21
UBL4AP11441 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.35■□□□□ 0.21
UBL4AP11441 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
UBL4AP11441 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.35■□□□□ 0.21
UBL4AP11441 AC092850.2-201ENST00000623821 2697 ntBASIC16.35■□□□□ 0.21
UBL4AP11441 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.35■□□□□ 0.21
UBL4AP11441 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
UBL4AP11441 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.35■□□□□ 0.21
UBL4AP11441 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
UBL4AP11441 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
UBL4AP11441 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.35■□□□□ 0.21
UBL4AP11441 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL4AP11441 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
UBL4AP11441 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
UBL4AP11441 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
UBL4AP11441 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.34■□□□□ 0.21
UBL4AP11441 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.34■□□□□ 0.21
UBL4AP11441 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL4AP11441 DDX43P3-201ENST00000441064 443 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms