Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD48P09326 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.28■□□□□ 0.52
CD48P09326 AC011840.4-201ENST00000578471 627 ntBASIC18.28■□□□□ 0.52
CD48P09326 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.28■□□□□ 0.52
CD48P09326 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.28■□□□□ 0.52
CD48P09326 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.28■□□□□ 0.52
CD48P09326 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CD48P09326 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD48P09326 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CD48P09326 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.28■□□□□ 0.52
CD48P09326 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD48P09326 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD48P09326 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD48P09326 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.28■□□□□ 0.52
CD48P09326 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD48P09326 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CD48P09326 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD48P09326 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD48P09326 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.28■□□□□ 0.52
CD48P09326 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD48P09326 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD48P09326 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD48P09326 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.27■□□□□ 0.52
CD48P09326 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CD48P09326 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.27■□□□□ 0.52
CD48P09326 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CD48P09326 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD48P09326 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD48P09326 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.27■□□□□ 0.52
CD48P09326 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CD48P09326 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CD48P09326 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.27■□□□□ 0.52
CD48P09326 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD48P09326 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CD48P09326 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD48P09326 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD48P09326 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CD48P09326 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.27■□□□□ 0.52
CD48P09326 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.27■□□□□ 0.52
CD48P09326 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.27■□□□□ 0.52
CD48P09326 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD48P09326 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.27■□□□□ 0.52
CD48P09326 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CD48P09326 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD48P09326 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CD48P09326 IER3-202ENST00000376377 1350 ntBASIC18.27■□□□□ 0.51
CD48P09326 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CD48P09326 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CD48P09326 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CD48P09326 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CD48P09326 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.27■□□□□ 0.51
CD48P09326 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.51
CD48P09326 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CD48P09326 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD48P09326 AC022211.2-201ENST00000585075 2527 ntBASIC18.26■□□□□ 0.51
CD48P09326 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD48P09326 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD48P09326 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD48P09326 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD48P09326 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.26■□□□□ 0.51
CD48P09326 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD48P09326 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CD48P09326 TSSC2-201ENST00000450217 709 ntBASIC18.26■□□□□ 0.51
CD48P09326 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.26■□□□□ 0.51
CD48P09326 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD48P09326 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CD48P09326 AL445228.2-201ENST00000605589 952 ntBASIC18.26■□□□□ 0.51
CD48P09326 AC019129.2-201ENST00000609837 1235 ntBASIC18.26■□□□□ 0.51
CD48P09326 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD48P09326 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.26■□□□□ 0.51
CD48P09326 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CD48P09326 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD48P09326 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD48P09326 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD48P09326 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD48P09326 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.26■□□□□ 0.51
CD48P09326 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CD48P09326 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.25■□□□□ 0.51
CD48P09326 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CD48P09326 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.25■□□□□ 0.51
CD48P09326 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.25■□□□□ 0.51
CD48P09326 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.25■□□□□ 0.51
CD48P09326 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.25■□□□□ 0.51
CD48P09326 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.25■□□□□ 0.51
CD48P09326 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.25■□□□□ 0.51
CD48P09326 AL358472.4-201ENST00000633140 710 ntBASIC18.25■□□□□ 0.51
CD48P09326 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD48P09326 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms