Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOA4P06727 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
APOA4P06727 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.71■□□□□ 0.43
APOA4P06727 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
APOA4P06727 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOA4P06727 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
APOA4P06727 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOA4P06727 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOA4P06727 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOA4P06727 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.71■□□□□ 0.43
APOA4P06727 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.71■□□□□ 0.43
APOA4P06727 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.71■□□□□ 0.43
APOA4P06727 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
APOA4P06727 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
APOA4P06727 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
APOA4P06727 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.71■□□□□ 0.43
APOA4P06727 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.71■□□□□ 0.43
APOA4P06727 RNF126P1-202ENST00000569893 925 ntBASIC17.71■□□□□ 0.43
APOA4P06727 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
APOA4P06727 AC009154.2-201ENST00000621177 724 ntBASIC17.71■□□□□ 0.43
APOA4P06727 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.71■□□□□ 0.43
APOA4P06727 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.71■□□□□ 0.43
APOA4P06727 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOA4P06727 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOA4P06727 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
APOA4P06727 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOA4P06727 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOA4P06727 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOA4P06727 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
APOA4P06727 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
APOA4P06727 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.71■□□□□ 0.43
APOA4P06727 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOA4P06727 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOA4P06727 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
APOA4P06727 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.71■□□□□ 0.42
APOA4P06727 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
APOA4P06727 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
APOA4P06727 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
APOA4P06727 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.7■□□□□ 0.42
APOA4P06727 AD000864.1-201ENST00000624076 2295 ntBASIC17.7■□□□□ 0.42
APOA4P06727 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
APOA4P06727 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.7■□□□□ 0.42
APOA4P06727 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.7■□□□□ 0.42
APOA4P06727 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
APOA4P06727 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
APOA4P06727 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.7■□□□□ 0.42
APOA4P06727 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.7■□□□□ 0.42
APOA4P06727 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
APOA4P06727 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.7■□□□□ 0.42
APOA4P06727 AC011498.5-201ENST00000592027 486 ntBASIC17.7■□□□□ 0.42
APOA4P06727 AC010331.1-201ENST00000611423 582 ntBASIC17.7■□□□□ 0.42
APOA4P06727 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.7■□□□□ 0.42
APOA4P06727 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 AC080080.1-201ENST00000625121 2420 ntBASIC17.7■□□□□ 0.42
APOA4P06727 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APOA4P06727 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.69■□□□□ 0.42
APOA4P06727 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.69■□□□□ 0.42
APOA4P06727 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
APOA4P06727 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.69■□□□□ 0.42
APOA4P06727 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
APOA4P06727 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.69■□□□□ 0.42
APOA4P06727 KRT18P35-201ENST00000510488 1269 ntBASIC17.69■□□□□ 0.42
APOA4P06727 FAM86EP-206ENST00000510506 987 ntBASIC17.69■□□□□ 0.42
APOA4P06727 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.69■□□□□ 0.42
APOA4P06727 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.69■□□□□ 0.42
APOA4P06727 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.69■□□□□ 0.42
APOA4P06727 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
APOA4P06727 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.69■□□□□ 0.42
APOA4P06727 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.69■□□□□ 0.42
APOA4P06727 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
APOA4P06727 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms