Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
POLR3DP05423 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.09■□□□□ 0.97
POLR3DP05423 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.09■□□□□ 0.97
POLR3DP05423 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POLR3DP05423 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR3DP05423 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POLR3DP05423 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POLR3DP05423 AL356309.3-201ENST00000624132 1934 ntBASIC21.09■□□□□ 0.97
POLR3DP05423 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POLR3DP05423 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.09■□□□□ 0.97
POLR3DP05423 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.09■□□□□ 0.97
POLR3DP05423 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR3DP05423 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
POLR3DP05423 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR3DP05423 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
POLR3DP05423 AC138028.4-201ENST00000564984 1845 ntBASIC21.08■□□□□ 0.97
POLR3DP05423 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR3DP05423 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR3DP05423 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR3DP05423 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR3DP05423 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.08■□□□□ 0.97
POLR3DP05423 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
POLR3DP05423 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR3DP05423 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
POLR3DP05423 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
POLR3DP05423 AC008764.6-201ENST00000595909 2069 ntBASIC21.08■□□□□ 0.97
POLR3DP05423 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
POLR3DP05423 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR3DP05423 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR3DP05423 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR3DP05423 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR3DP05423 COX5BP2-201ENST00000392354 334 ntBASIC21.08■□□□□ 0.97
POLR3DP05423 AL022342.1-201ENST00000400363 863 ntBASIC21.08■□□□□ 0.97
POLR3DP05423 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR3DP05423 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.08■□□□□ 0.97
POLR3DP05423 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
POLR3DP05423 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
POLR3DP05423 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.08■□□□□ 0.97
POLR3DP05423 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.08■□□□□ 0.97
POLR3DP05423 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.08■□□□□ 0.97
POLR3DP05423 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.08■□□□□ 0.97
POLR3DP05423 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.08■□□□□ 0.97
POLR3DP05423 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.08■□□□□ 0.97
POLR3DP05423 AP000867.4-201ENST00000641616 219 ntBASIC21.08■□□□□ 0.97
POLR3DP05423 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
POLR3DP05423 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
POLR3DP05423 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
POLR3DP05423 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
POLR3DP05423 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
POLR3DP05423 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
POLR3DP05423 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
POLR3DP05423 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR3DP05423 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR3DP05423 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR3DP05423 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
POLR3DP05423 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR3DP05423 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR3DP05423 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
POLR3DP05423 AP000997.3-201ENST00000623333 2250 ntBASIC21.07■□□□□ 0.96
POLR3DP05423 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR3DP05423 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR3DP05423 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
POLR3DP05423 AL590627.1-203ENST00000421194 1026 ntBASIC21.07■□□□□ 0.96
POLR3DP05423 AC018712.1-201ENST00000455767 687 ntBASIC21.07■□□□□ 0.96
POLR3DP05423 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.07■□□□□ 0.96
POLR3DP05423 AC021087.4-201ENST00000563761 564 ntBASIC21.07■□□□□ 0.96
POLR3DP05423 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.07■□□□□ 0.96
POLR3DP05423 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.07■□□□□ 0.96
POLR3DP05423 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.07■□□□□ 0.96
POLR3DP05423 AC116407.2-201ENST00000613639 860 ntBASIC21.07■□□□□ 0.96
POLR3DP05423 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR3DP05423 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR3DP05423 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.07■□□□□ 0.96
POLR3DP05423 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR3DP05423 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR3DP05423 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR3DP05423 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR3DP05423 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
POLR3DP05423 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.06■□□□□ 0.96
POLR3DP05423 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
POLR3DP05423 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
POLR3DP05423 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR3DP05423 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR3DP05423 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR3DP05423 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.06■□□□□ 0.96
POLR3DP05423 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR3DP05423 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
POLR3DP05423 AC093909.1-201ENST00000504731 1122 ntBASIC21.06■□□□□ 0.96
POLR3DP05423 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.06■□□□□ 0.96
POLR3DP05423 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.06■□□□□ 0.96
POLR3DP05423 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.06■□□□□ 0.96
POLR3DP05423 AC120114.3-201ENST00000611923 658 ntBASIC21.06■□□□□ 0.96
POLR3DP05423 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.06■□□□□ 0.96
POLR3DP05423 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
POLR3DP05423 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR3DP05423 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
POLR3DP05423 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
POLR3DP05423 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
POLR3DP05423 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR3DP05423 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms