Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBC1P01850 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBC1P01850 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBC1P01850 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBC1P01850 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBC1P01850 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBC1P01850 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBC1P01850 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBC1P01850 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.68■□□□□ 0.42
TRBC1P01850 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBC1P01850 ABCD1P5-201ENST00000445663 754 ntBASIC17.68■□□□□ 0.42
TRBC1P01850 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.68■□□□□ 0.42
TRBC1P01850 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.68■□□□□ 0.42
TRBC1P01850 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBC1P01850 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRBC1P01850 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBC1P01850 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBC1P01850 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBC1P01850 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBC1P01850 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRBC1P01850 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 KRT8P10-201ENST00000450021 1447 ntBASIC17.67■□□□□ 0.42
TRBC1P01850 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBC1P01850 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBC1P01850 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 AC109462.3-201ENST00000573934 613 ntBASIC17.67■□□□□ 0.42
TRBC1P01850 REXO1L6P-202ENST00000619970 1078 ntBASIC17.67■□□□□ 0.42
TRBC1P01850 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 AL353593.2-201ENST00000602529 1483 ntBASIC17.67■□□□□ 0.42
TRBC1P01850 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRBC1P01850 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBC1P01850 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBC1P01850 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBC1P01850 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBC1P01850 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBC1P01850 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBC1P01850 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBC1P01850 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBC1P01850 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBC1P01850 HLA-J-201ENST00000462773 1622 ntBASIC17.66■□□□□ 0.42
TRBC1P01850 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBC1P01850 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBC1P01850 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBC1P01850 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBC1P01850 AKR1C7P-201ENST00000305623 895 ntBASIC17.66■□□□□ 0.42
TRBC1P01850 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRBC1P01850 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBC1P01850 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBC1P01850 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.66■□□□□ 0.42
TRBC1P01850 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBC1P01850 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TRBC1P01850 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBC1P01850 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBC1P01850 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBC1P01850 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBC1P01850 AP001269.4-201ENST00000609611 512 ntBASIC17.66■□□□□ 0.42
TRBC1P01850 AP000867.4-201ENST00000641616 219 ntBASIC17.66■□□□□ 0.42
TRBC1P01850 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBC1P01850 AC133963.1-201ENST00000504166 1679 ntBASIC17.66■□□□□ 0.42
TRBC1P01850 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBC1P01850 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBC1P01850 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBC1P01850 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBC1P01850 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBC1P01850 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBC1P01850 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRBC1P01850 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBC1P01850 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBC1P01850 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRBC1P01850 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBC1P01850 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
TRBC1P01850 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBC1P01850 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.65■□□□□ 0.42
TRBC1P01850 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBC1P01850 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBC1P01850 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBC1P01850 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBC1P01850 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBC1P01850 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBC1P01850 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.65■□□□□ 0.42
TRBC1P01850 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.65■□□□□ 0.42
TRBC1P01850 AC106795.1-205ENST00000512851 1056 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms