Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TOMM40O96008 DDX43P3-201ENST00000441064 443 ntBASIC13.86□□□□□ -0.19
TOMM40O96008 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TOMM40O96008 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.86□□□□□ -0.19
TOMM40O96008 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.86□□□□□ -0.19
TOMM40O96008 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TOMM40O96008 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.86□□□□□ -0.19
TOMM40O96008 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.86□□□□□ -0.19
TOMM40O96008 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.86□□□□□ -0.19
TOMM40O96008 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
TOMM40O96008 GCSHP2-201ENST00000560971 527 ntBASIC13.86□□□□□ -0.19
TOMM40O96008 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.86□□□□□ -0.19
TOMM40O96008 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.86□□□□□ -0.19
TOMM40O96008 LINC01451-201ENST00000623792 534 ntBASIC13.86□□□□□ -0.19
TOMM40O96008 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TOMM40O96008 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.86□□□□□ -0.19
TOMM40O96008 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.86□□□□□ -0.19
TOMM40O96008 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TOMM40O96008 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TOMM40O96008 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TOMM40O96008 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TOMM40O96008 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.86□□□□□ -0.19
TOMM40O96008 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TOMM40O96008 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
TOMM40O96008 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TOMM40O96008 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TOMM40O96008 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TOMM40O96008 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
TOMM40O96008 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.86□□□□□ -0.19
TOMM40O96008 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TOMM40O96008 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.85□□□□□ -0.19
TOMM40O96008 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.85□□□□□ -0.19
TOMM40O96008 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.85□□□□□ -0.19
TOMM40O96008 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.85□□□□□ -0.19
TOMM40O96008 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TOMM40O96008 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
TOMM40O96008 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.85□□□□□ -0.19
TOMM40O96008 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.85□□□□□ -0.19
TOMM40O96008 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
TOMM40O96008 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.85□□□□□ -0.19
TOMM40O96008 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.85□□□□□ -0.19
TOMM40O96008 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.85□□□□□ -0.19
TOMM40O96008 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.85□□□□□ -0.19
TOMM40O96008 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.85□□□□□ -0.19
TOMM40O96008 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.85□□□□□ -0.19
TOMM40O96008 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
TOMM40O96008 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TOMM40O96008 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TOMM40O96008 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TOMM40O96008 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TOMM40O96008 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TOMM40O96008 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.85□□□□□ -0.19
TOMM40O96008 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TOMM40O96008 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TOMM40O96008 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TOMM40O96008 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TOMM40O96008 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TOMM40O96008 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TOMM40O96008 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TOMM40O96008 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TOMM40O96008 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TOMM40O96008 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.84□□□□□ -0.19
TOMM40O96008 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TOMM40O96008 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TOMM40O96008 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.84□□□□□ -0.19
TOMM40O96008 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TOMM40O96008 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TOMM40O96008 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TOMM40O96008 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.84□□□□□ -0.19
TOMM40O96008 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TOMM40O96008 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TOMM40O96008 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TOMM40O96008 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TOMM40O96008 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.84□□□□□ -0.19
TOMM40O96008 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.84□□□□□ -0.19
TOMM40O96008 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.84□□□□□ -0.19
TOMM40O96008 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
TOMM40O96008 AL138966.2-201ENST00000621997 464 ntBASIC13.84□□□□□ -0.19
TOMM40O96008 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TOMM40O96008 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TOMM40O96008 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TOMM40O96008 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms