Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC23.16■■□□□ 1.3
LTN1O94822 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC23.16■■□□□ 1.3
LTN1O94822 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC23.16■■□□□ 1.3
LTN1O94822 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LTN1O94822 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LTN1O94822 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
LTN1O94822 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC23.16■■□□□ 1.3
LTN1O94822 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
LTN1O94822 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LTN1O94822 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC23.16■■□□□ 1.3
LTN1O94822 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC23.16■■□□□ 1.3
LTN1O94822 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LTN1O94822 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LTN1O94822 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LTN1O94822 KRT18P32-201ENST00000424695 1287 ntBASIC23.15■■□□□ 1.3
LTN1O94822 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LTN1O94822 AC140658.5-201ENST00000438532 169 ntBASIC23.15■■□□□ 1.3
LTN1O94822 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LTN1O94822 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LTN1O94822 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC23.15■■□□□ 1.3
LTN1O94822 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC23.15■■□□□ 1.3
LTN1O94822 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC23.15■■□□□ 1.3
LTN1O94822 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LTN1O94822 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LTN1O94822 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
LTN1O94822 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC23.15■■□□□ 1.3
LTN1O94822 AL138781.2-201ENST00000617896 1843 ntBASIC23.15■■□□□ 1.3
LTN1O94822 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
LTN1O94822 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC23.15■■□□□ 1.3
LTN1O94822 PI4KAP1-204ENST00000612579 1703 ntBASIC23.15■■□□□ 1.3
LTN1O94822 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
LTN1O94822 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC23.15■■□□□ 1.3
LTN1O94822 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LTN1O94822 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
LTN1O94822 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC23.14■■□□□ 1.3
LTN1O94822 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC23.14■■□□□ 1.3
LTN1O94822 AC138028.4-201ENST00000564984 1845 ntBASIC23.14■■□□□ 1.3
LTN1O94822 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
LTN1O94822 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
LTN1O94822 AL627223.1-201ENST00000416693 442 ntBASIC23.14■■□□□ 1.3
LTN1O94822 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC23.14■■□□□ 1.3
LTN1O94822 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
LTN1O94822 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC23.14■■□□□ 1.3
LTN1O94822 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
LTN1O94822 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
LTN1O94822 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
LTN1O94822 AC090164.3-201ENST00000610780 2143 ntBASIC23.14■■□□□ 1.3
LTN1O94822 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.3
LTN1O94822 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23.14■■□□□ 1.3
LTN1O94822 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
LTN1O94822 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
LTN1O94822 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
LTN1O94822 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LTN1O94822 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC23.14■■□□□ 1.29
LTN1O94822 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
LTN1O94822 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LTN1O94822 NEK7-201ENST00000367383 586 ntTSL 2 BASIC23.14■■□□□ 1.29
LTN1O94822 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC23.14■■□□□ 1.29
LTN1O94822 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LTN1O94822 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC23.14■■□□□ 1.29
LTN1O94822 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC23.14■■□□□ 1.29
LTN1O94822 MIR3197-201ENST00000582241 73 ntBASIC23.14■■□□□ 1.29
LTN1O94822 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
LTN1O94822 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LTN1O94822 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC23.14■■□□□ 1.29
LTN1O94822 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
LTN1O94822 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
LTN1O94822 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LTN1O94822 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.14■■□□□ 1.29
LTN1O94822 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LTN1O94822 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC23.13■■□□□ 1.29
LTN1O94822 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
LTN1O94822 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC23.13■■□□□ 1.29
LTN1O94822 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC23.13■■□□□ 1.29
LTN1O94822 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC23.13■■□□□ 1.29
LTN1O94822 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LTN1O94822 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LTN1O94822 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LTN1O94822 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LTN1O94822 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
LTN1O94822 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LTN1O94822 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LTN1O94822 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC23.12■■□□□ 1.29
LTN1O94822 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LTN1O94822 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
LTN1O94822 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC23.12■■□□□ 1.29
LTN1O94822 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
LTN1O94822 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC23.12■■□□□ 1.29
LTN1O94822 AL035633.1-201ENST00000406139 838 ntBASIC23.12■■□□□ 1.29
LTN1O94822 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC23.12■■□□□ 1.29
LTN1O94822 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC23.12■■□□□ 1.29
LTN1O94822 AC112191.1-201ENST00000523689 701 ntBASIC23.12■■□□□ 1.29
LTN1O94822 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC23.12■■□□□ 1.29
LTN1O94822 RPL28-209ENST00000560055 670 ntTSL 3 BASIC23.12■■□□□ 1.29
LTN1O94822 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC23.12■■□□□ 1.29
LTN1O94822 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC23.12■■□□□ 1.29
LTN1O94822 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC23.12■■□□□ 1.29
LTN1O94822 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC23.12■■□□□ 1.29
LTN1O94822 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
LTN1O94822 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms