Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.79□□□□□ -0.2
ZNF253O75346 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF253O75346 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
ZNF253O75346 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ZNF253O75346 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 ABHD17AP1-201ENST00000358206 933 ntBASIC13.79□□□□□ -0.2
ZNF253O75346 CRYGFP-201ENST00000418459 633 ntBASIC13.79□□□□□ -0.2
ZNF253O75346 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ZNF253O75346 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.79□□□□□ -0.2
ZNF253O75346 AC104390.1-201ENST00000555663 520 ntBASIC13.79□□□□□ -0.2
ZNF253O75346 AL353719.1-201ENST00000566847 864 ntBASIC13.79□□□□□ -0.2
ZNF253O75346 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF253O75346 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF253O75346 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.79□□□□□ -0.2
ZNF253O75346 ITM2C-210ENST00000620962 501 ntBASIC13.79□□□□□ -0.2
ZNF253O75346 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF253O75346 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.79□□□□□ -0.2
ZNF253O75346 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ZNF253O75346 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ZNF253O75346 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
ZNF253O75346 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ZNF253O75346 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF253O75346 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.78□□□□□ -0.2
ZNF253O75346 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.78□□□□□ -0.2
ZNF253O75346 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ZNF253O75346 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ZNF253O75346 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.78□□□□□ -0.2
ZNF253O75346 PCDHB19P-201ENST00000570871 2371 ntBASIC13.78□□□□□ -0.2
ZNF253O75346 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ZNF253O75346 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ZNF253O75346 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.78□□□□□ -0.2
ZNF253O75346 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.78□□□□□ -0.2
ZNF253O75346 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ZNF253O75346 REXO1L10P-201ENST00000615707 1290 ntBASIC13.78□□□□□ -0.2
ZNF253O75346 REXO1L12P-201ENST00000622156 912 ntBASIC13.78□□□□□ -0.2
ZNF253O75346 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
ZNF253O75346 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ZNF253O75346 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.78□□□□□ -0.2
ZNF253O75346 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.78□□□□□ -0.2
ZNF253O75346 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ZNF253O75346 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ZNF253O75346 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ZNF253O75346 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.78□□□□□ -0.2
ZNF253O75346 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.78□□□□□ -0.2
ZNF253O75346 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
ZNF253O75346 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
ZNF253O75346 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF253O75346 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZNF253O75346 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
ZNF253O75346 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZNF253O75346 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
ZNF253O75346 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZNF253O75346 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
ZNF253O75346 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF253O75346 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF253O75346 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF253O75346 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF253O75346 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF253O75346 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF253O75346 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF253O75346 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.77□□□□□ -0.21
ZNF253O75346 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF253O75346 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF253O75346 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms