Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHL41O60662 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
KLHL41O60662 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KLHL41O60662 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHL41O60662 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHL41O60662 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHL41O60662 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHL41O60662 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.55■□□□□ 0.4
KLHL41O60662 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KLHL41O60662 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
KLHL41O60662 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KLHL41O60662 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KLHL41O60662 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KLHL41O60662 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KLHL41O60662 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.54■□□□□ 0.4
KLHL41O60662 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KLHL41O60662 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KLHL41O60662 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KLHL41O60662 AC100803.2-201ENST00000562459 1963 ntBASIC17.54■□□□□ 0.4
KLHL41O60662 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KLHL41O60662 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.54■□□□□ 0.4
KLHL41O60662 ZNF444P1-201ENST00000559497 298 ntBASIC17.54■□□□□ 0.4
KLHL41O60662 MIR4674-201ENST00000582457 87 ntBASIC17.54■□□□□ 0.4
KLHL41O60662 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.54■□□□□ 0.4
KLHL41O60662 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KLHL41O60662 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KLHL41O60662 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KLHL41O60662 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KLHL41O60662 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
KLHL41O60662 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
KLHL41O60662 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KLHL41O60662 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KLHL41O60662 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KLHL41O60662 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KLHL41O60662 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL41O60662 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL41O60662 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL41O60662 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.53■□□□□ 0.4
KLHL41O60662 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
KLHL41O60662 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KLHL41O60662 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL41O60662 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL41O60662 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.53■□□□□ 0.4
KLHL41O60662 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
KLHL41O60662 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL41O60662 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL41O60662 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL41O60662 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL41O60662 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL41O60662 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.53■□□□□ 0.4
KLHL41O60662 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.53■□□□□ 0.4
KLHL41O60662 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.53■□□□□ 0.4
KLHL41O60662 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.53■□□□□ 0.4
KLHL41O60662 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL41O60662 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL41O60662 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.53■□□□□ 0.4
KLHL41O60662 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.53■□□□□ 0.4
KLHL41O60662 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL41O60662 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL41O60662 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL41O60662 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KLHL41O60662 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.53■□□□□ 0.4
KLHL41O60662 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KLHL41O60662 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
KLHL41O60662 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.53■□□□□ 0.4
KLHL41O60662 AL138688.1-201ENST00000624851 1594 ntBASIC17.53■□□□□ 0.4
KLHL41O60662 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL41O60662 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL41O60662 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
KLHL41O60662 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
KLHL41O60662 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
KLHL41O60662 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.52■□□□□ 0.4
KLHL41O60662 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.52■□□□□ 0.4
KLHL41O60662 AC005332.1-201ENST00000577698 1310 ntBASIC17.52■□□□□ 0.4
KLHL41O60662 AC133963.1-201ENST00000504166 1679 ntBASIC17.52■□□□□ 0.4
KLHL41O60662 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.52■□□□□ 0.4
KLHL41O60662 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
KLHL41O60662 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
KLHL41O60662 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
KLHL41O60662 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
KLHL41O60662 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.52■□□□□ 0.4
KLHL41O60662 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KLHL41O60662 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KLHL41O60662 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.52■□□□□ 0.4
KLHL41O60662 AC112907.2-201ENST00000448639 330 ntBASIC17.52■□□□□ 0.4
KLHL41O60662 KRT126P-201ENST00000549467 1181 ntBASIC17.52■□□□□ 0.4
KLHL41O60662 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.52■□□□□ 0.4
KLHL41O60662 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KLHL41O60662 OR6D1P-203ENST00000641209 4860 ntBASIC17.52■□□□□ 0.39
KLHL41O60662 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.52■□□□□ 0.39
KLHL41O60662 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KLHL41O60662 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.52■□□□□ 0.39
KLHL41O60662 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KLHL41O60662 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
KLHL41O60662 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
KLHL41O60662 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KLHL41O60662 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
KLHL41O60662 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.51■□□□□ 0.39
KLHL41O60662 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
KLHL41O60662 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms