Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.86■□□□□ 0.13
ZIC3O60481 MYCLP1-201ENST00000372451 1075 ntBASIC15.86■□□□□ 0.13
ZIC3O60481 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ZIC3O60481 PRYP5-201ENST00000451909 266 ntBASIC15.86■□□□□ 0.13
ZIC3O60481 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.86■□□□□ 0.13
ZIC3O60481 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.86■□□□□ 0.13
ZIC3O60481 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.86■□□□□ 0.13
ZIC3O60481 AC021087.4-201ENST00000563761 564 ntBASIC15.86■□□□□ 0.13
ZIC3O60481 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.86■□□□□ 0.13
ZIC3O60481 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.86■□□□□ 0.13
ZIC3O60481 SLC25A6P4-201ENST00000586535 553 ntBASIC15.86■□□□□ 0.13
ZIC3O60481 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.86■□□□□ 0.13
ZIC3O60481 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.86■□□□□ 0.13
ZIC3O60481 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.86■□□□□ 0.13
ZIC3O60481 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.86■□□□□ 0.13
ZIC3O60481 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.86■□□□□ 0.13
ZIC3O60481 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
ZIC3O60481 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.86■□□□□ 0.13
ZIC3O60481 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
ZIC3O60481 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
ZIC3O60481 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.86■□□□□ 0.13
ZIC3O60481 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ZIC3O60481 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZIC3O60481 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZIC3O60481 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZIC3O60481 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.85■□□□□ 0.13
ZIC3O60481 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.85■□□□□ 0.13
ZIC3O60481 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZIC3O60481 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.85■□□□□ 0.13
ZIC3O60481 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.85■□□□□ 0.13
ZIC3O60481 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ZIC3O60481 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ZIC3O60481 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZIC3O60481 AL133373.2-201ENST00000623187 2828 ntBASIC15.85■□□□□ 0.13
ZIC3O60481 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZIC3O60481 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ZIC3O60481 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
ZIC3O60481 AC003669.1-201ENST00000334569 611 ntBASIC15.85■□□□□ 0.13
ZIC3O60481 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZIC3O60481 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ZIC3O60481 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ZIC3O60481 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.85■□□□□ 0.13
ZIC3O60481 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
ZIC3O60481 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ZIC3O60481 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
ZIC3O60481 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZIC3O60481 AL020989.1-201ENST00000422979 469 ntBASIC15.85■□□□□ 0.13
ZIC3O60481 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
ZIC3O60481 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.85■□□□□ 0.13
ZIC3O60481 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZIC3O60481 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ZIC3O60481 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.85■□□□□ 0.13
ZIC3O60481 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.85■□□□□ 0.13
ZIC3O60481 AC148477.8-201ENST00000624298 468 ntBASIC15.85■□□□□ 0.13
ZIC3O60481 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ZIC3O60481 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.85■□□□□ 0.13
ZIC3O60481 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
ZIC3O60481 AC068880.1-201ENST00000507289 2297 ntBASIC15.85■□□□□ 0.13
ZIC3O60481 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.85■□□□□ 0.13
ZIC3O60481 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
ZIC3O60481 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZIC3O60481 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ZIC3O60481 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZIC3O60481 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ZIC3O60481 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ZIC3O60481 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ZIC3O60481 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
ZIC3O60481 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.84■□□□□ 0.13
ZIC3O60481 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
ZIC3O60481 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
ZIC3O60481 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
ZIC3O60481 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 HLA-J-201ENST00000462773 1622 ntBASIC15.84■□□□□ 0.13
ZIC3O60481 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 AC133963.1-201ENST00000504166 1679 ntBASIC15.84■□□□□ 0.13
ZIC3O60481 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ZIC3O60481 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.84■□□□□ 0.13
ZIC3O60481 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.84■□□□□ 0.13
ZIC3O60481 KLF4P1-201ENST00000412782 1185 ntBASIC15.84■□□□□ 0.13
ZIC3O60481 KRT18P67-201ENST00000432816 1264 ntBASIC15.84■□□□□ 0.13
ZIC3O60481 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
ZIC3O60481 HNRNPDP1-201ENST00000439535 754 ntBASIC15.84■□□□□ 0.13
ZIC3O60481 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.84■□□□□ 0.13
ZIC3O60481 BX005266.1-201ENST00000473402 457 ntBASIC15.84■□□□□ 0.13
ZIC3O60481 STK19B-204ENST00000512515 211 ntBASIC15.84■□□□□ 0.13
ZIC3O60481 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.84■□□□□ 0.13
ZIC3O60481 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.84■□□□□ 0.13
ZIC3O60481 AC064862.7-201ENST00000604520 867 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms