Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC28A2O43868 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 AC244107.1-201ENST00000442033 332 ntBASIC17.03■□□□□ 0.32
SLC28A2O43868 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC28A2O43868 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.03■□□□□ 0.32
SLC28A2O43868 AC009065.1-201ENST00000564055 1225 ntBASIC17.03■□□□□ 0.32
SLC28A2O43868 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC28A2O43868 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SLC28A2O43868 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
SLC28A2O43868 AC112497.1-201ENST00000624824 639 ntBASIC17.03■□□□□ 0.32
SLC28A2O43868 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SLC28A2O43868 FZD10-202ENST00000539839 3282 ntBASIC17.03■□□□□ 0.32
SLC28A2O43868 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SLC28A2O43868 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SLC28A2O43868 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC28A2O43868 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC28A2O43868 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
SLC28A2O43868 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC28A2O43868 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC28A2O43868 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.02■□□□□ 0.32
SLC28A2O43868 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC28A2O43868 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC28A2O43868 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC28A2O43868 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC28A2O43868 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC28A2O43868 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC28A2O43868 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC28A2O43868 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SLC28A2O43868 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SLC28A2O43868 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
SLC28A2O43868 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC28A2O43868 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC28A2O43868 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC28A2O43868 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.02■□□□□ 0.32
SLC28A2O43868 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.02■□□□□ 0.32
SLC28A2O43868 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.02■□□□□ 0.32
SLC28A2O43868 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC28A2O43868 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC28A2O43868 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.02■□□□□ 0.31
SLC28A2O43868 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SLC28A2O43868 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.02■□□□□ 0.31
SLC28A2O43868 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SLC28A2O43868 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC28A2O43868 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC28A2O43868 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC28A2O43868 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC28A2O43868 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC28A2O43868 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC28A2O43868 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.02■□□□□ 0.31
SLC28A2O43868 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC28A2O43868 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SLC28A2O43868 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SLC28A2O43868 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC28A2O43868 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC28A2O43868 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC28A2O43868 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC28A2O43868 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC28A2O43868 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC28A2O43868 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC28A2O43868 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SLC28A2O43868 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC28A2O43868 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SLC28A2O43868 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC28A2O43868 UPF3AP3-201ENST00000420996 769 ntBASIC17.01■□□□□ 0.31
SLC28A2O43868 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC28A2O43868 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.01■□□□□ 0.31
SLC28A2O43868 MIR3197-201ENST00000582241 73 ntBASIC17.01■□□□□ 0.31
SLC28A2O43868 AC010327.4-202ENST00000591484 748 ntBASIC17.01■□□□□ 0.31
SLC28A2O43868 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC28A2O43868 AC148477.8-201ENST00000624298 468 ntBASIC17.01■□□□□ 0.31
SLC28A2O43868 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC28A2O43868 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC28A2O43868 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC28A2O43868 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC28A2O43868 AP000997.3-201ENST00000623333 2250 ntBASIC17.01■□□□□ 0.31
SLC28A2O43868 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC28A2O43868 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC28A2O43868 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC28A2O43868 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC28A2O43868 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms