Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RIPK2O43353 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.93■□□□□ 0.46
RIPK2O43353 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
RIPK2O43353 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RIPK2O43353 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 UNC93B2-201ENST00000285383 730 ntBASIC17.93■□□□□ 0.46
RIPK2O43353 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RIPK2O43353 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.93■□□□□ 0.46
RIPK2O43353 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.93■□□□□ 0.46
RIPK2O43353 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.93■□□□□ 0.46
RIPK2O43353 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RIPK2O43353 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.93■□□□□ 0.46
RIPK2O43353 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
RIPK2O43353 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIPK2O43353 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.93■□□□□ 0.46
RIPK2O43353 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RIPK2O43353 BX276092.7-203ENST00000637198 1536 ntBASIC17.93■□□□□ 0.46
RIPK2O43353 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.92■□□□□ 0.46
RIPK2O43353 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIPK2O43353 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIPK2O43353 LINC02012-201ENST00000608206 1725 ntBASIC17.92■□□□□ 0.46
RIPK2O43353 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.92■□□□□ 0.46
RIPK2O43353 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIPK2O43353 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.92■□□□□ 0.46
RIPK2O43353 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.92■□□□□ 0.46
RIPK2O43353 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIPK2O43353 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIPK2O43353 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIPK2O43353 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RIPK2O43353 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIPK2O43353 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.92■□□□□ 0.46
RIPK2O43353 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.92■□□□□ 0.46
RIPK2O43353 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RIPK2O43353 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.92■□□□□ 0.46
RIPK2O43353 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RIPK2O43353 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.92■□□□□ 0.46
RIPK2O43353 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RIPK2O43353 AP003071.4-201ENST00000562276 1284 ntBASIC17.92■□□□□ 0.46
RIPK2O43353 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.92■□□□□ 0.46
RIPK2O43353 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.92■□□□□ 0.46
RIPK2O43353 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.92■□□□□ 0.46
RIPK2O43353 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.92■□□□□ 0.46
RIPK2O43353 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.92■□□□□ 0.46
RIPK2O43353 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.92■□□□□ 0.46
RIPK2O43353 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.92■□□□□ 0.46
RIPK2O43353 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIPK2O43353 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIPK2O43353 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RIPK2O43353 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.92■□□□□ 0.46
RIPK2O43353 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIPK2O43353 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RIPK2O43353 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.92■□□□□ 0.46
RIPK2O43353 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIPK2O43353 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.92■□□□□ 0.46
RIPK2O43353 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RIPK2O43353 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RIPK2O43353 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.91■□□□□ 0.46
RIPK2O43353 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RIPK2O43353 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RIPK2O43353 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RIPK2O43353 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RIPK2O43353 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RIPK2O43353 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RIPK2O43353 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RIPK2O43353 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RIPK2O43353 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.91■□□□□ 0.46
RIPK2O43353 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RIPK2O43353 AC008894.3-201ENST00000624324 3103 ntBASIC17.91■□□□□ 0.46
RIPK2O43353 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RIPK2O43353 AC009947.2-201ENST00000444014 672 ntBASIC17.91■□□□□ 0.46
RIPK2O43353 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.91■□□□□ 0.46
RIPK2O43353 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.91■□□□□ 0.46
RIPK2O43353 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.91■□□□□ 0.46
RIPK2O43353 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.91■□□□□ 0.46
RIPK2O43353 AC092865.7-201ENST00000641832 219 ntBASIC17.91■□□□□ 0.46
RIPK2O43353 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RIPK2O43353 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RIPK2O43353 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.91■□□□□ 0.46
RIPK2O43353 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RIPK2O43353 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.91■□□□□ 0.46
RIPK2O43353 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RIPK2O43353 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
RIPK2O43353 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms