Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.55■□□□□ 0.24
AP3D1O14617 KRT18P38-201ENST00000449496 1282 ntBASIC16.55■□□□□ 0.24
AP3D1O14617 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.55■□□□□ 0.24
AP3D1O14617 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.55■□□□□ 0.24
AP3D1O14617 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
AP3D1O14617 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.55■□□□□ 0.24
AP3D1O14617 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.55■□□□□ 0.24
AP3D1O14617 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.55■□□□□ 0.24
AP3D1O14617 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.55■□□□□ 0.24
AP3D1O14617 AL136038.4-201ENST00000603606 1261 ntBASIC16.55■□□□□ 0.24
AP3D1O14617 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.55■□□□□ 0.24
AP3D1O14617 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.55■□□□□ 0.24
AP3D1O14617 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.55■□□□□ 0.24
AP3D1O14617 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.55■□□□□ 0.24
AP3D1O14617 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
AP3D1O14617 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3D1O14617 CICP6-201ENST00000457191 2729 ntBASIC16.54■□□□□ 0.24
AP3D1O14617 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.54■□□□□ 0.24
AP3D1O14617 LINC00167-201ENST00000530583 1419 ntBASIC16.54■□□□□ 0.24
AP3D1O14617 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.54■□□□□ 0.24
AP3D1O14617 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
AP3D1O14617 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
AP3D1O14617 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
AP3D1O14617 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.54■□□□□ 0.24
AP3D1O14617 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.54■□□□□ 0.24
AP3D1O14617 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 AC092597.1-201ENST00000487352 616 ntBASIC16.54■□□□□ 0.24
AP3D1O14617 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.54■□□□□ 0.24
AP3D1O14617 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.54■□□□□ 0.24
AP3D1O14617 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.54■□□□□ 0.24
AP3D1O14617 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.54■□□□□ 0.24
AP3D1O14617 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.54■□□□□ 0.24
AP3D1O14617 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
AP3D1O14617 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
AP3D1O14617 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3D1O14617 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
AP3D1O14617 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.54■□□□□ 0.24
AP3D1O14617 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
AP3D1O14617 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.53■□□□□ 0.24
AP3D1O14617 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
AP3D1O14617 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.53■□□□□ 0.24
AP3D1O14617 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
AP3D1O14617 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.53■□□□□ 0.24
AP3D1O14617 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 STARP1-201ENST00000397973 869 ntBASIC16.53■□□□□ 0.24
AP3D1O14617 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.53■□□□□ 0.24
AP3D1O14617 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.53■□□□□ 0.24
AP3D1O14617 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.53■□□□□ 0.24
AP3D1O14617 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.53■□□□□ 0.24
AP3D1O14617 AC116407.2-201ENST00000613639 860 ntBASIC16.53■□□□□ 0.24
AP3D1O14617 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
AP3D1O14617 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
AP3D1O14617 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3D1O14617 LINC00602-201ENST00000629776 2065 ntBASIC16.53■□□□□ 0.24
AP3D1O14617 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
AP3D1O14617 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms