Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC018695.7-201ENST00000624587 2492 ntBASIC17.36■□□□□ 0.37
TMX2-CTNND1H3BSU7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMX2-CTNND1H3BSU7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 MIR574-201ENST00000385209 96 ntBASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 RCN1P2-201ENST00000398357 915 ntBASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 AC134043.2-201ENST00000624206 2238 ntBASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMX2-CTNND1H3BSU7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 MYLKP1-201ENST00000509077 1580 ntBASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TMX2-CTNND1H3BSU7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMX2-CTNND1H3BSU7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.33■□□□□ 0.37
TMX2-CTNND1H3BSU7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMX2-CTNND1H3BSU7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMX2-CTNND1H3BSU7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMX2-CTNND1H3BSU7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.33■□□□□ 0.37
TMX2-CTNND1H3BSU7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMX2-CTNND1H3BSU7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.33■□□□□ 0.37
TMX2-CTNND1H3BSU7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMX2-CTNND1H3BSU7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMX2-CTNND1H3BSU7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMX2-CTNND1H3BSU7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMX2-CTNND1H3BSU7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TMX2-CTNND1H3BSU7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMX2-CTNND1H3BSU7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TMX2-CTNND1H3BSU7 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.33■□□□□ 0.36
TMX2-CTNND1H3BSU7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMX2-CTNND1H3BSU7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.33■□□□□ 0.36
TMX2-CTNND1H3BSU7 KRT18P13-201ENST00000400056 1290 ntBASIC17.33■□□□□ 0.36
TMX2-CTNND1H3BSU7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.33■□□□□ 0.36
TMX2-CTNND1H3BSU7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMX2-CTNND1H3BSU7 AC139887.3-201ENST00000568585 713 ntBASIC17.33■□□□□ 0.36
TMX2-CTNND1H3BSU7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.33■□□□□ 0.36
TMX2-CTNND1H3BSU7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.33■□□□□ 0.36
TMX2-CTNND1H3BSU7 MTDHP3-201ENST00000594186 672 ntBASIC17.33■□□□□ 0.36
TMX2-CTNND1H3BSU7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.33■□□□□ 0.36
TMX2-CTNND1H3BSU7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms