Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 AC005082.1-201ENST00000413042 2259 ntBASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 TSSK5P-201ENST00000423978 907 ntBASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 AC092658.1-201ENST00000505836 891 ntBASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 ALG1L8P-201ENST00000533887 760 ntBASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM88BA6NKF7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 AC098614.1-201ENST00000368528 745 ntBASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 ACTG1P4-201ENST00000425123 1122 ntBASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 ACA64.2-201ENST00000459014 129 ntBASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 AL162274.1-201ENST00000617191 1098 ntBASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 AC073592.8-201ENST00000624126 511 ntBASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM88BA6NKF7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM88BA6NKF7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM88BA6NKF7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.29■□□□□ 0.84
TMEM88BA6NKF7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM88BA6NKF7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM88BA6NKF7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TMEM88BA6NKF7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
TMEM88BA6NKF7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM88BA6NKF7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM88BA6NKF7 SLC25A6P2-201ENST00000497974 877 ntBASIC20.29■□□□□ 0.84
TMEM88BA6NKF7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM88BA6NKF7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TMEM88BA6NKF7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.29■□□□□ 0.84
TMEM88BA6NKF7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.29■□□□□ 0.84
TMEM88BA6NKF7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TMEM88BA6NKF7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM88BA6NKF7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms