Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 DDX43P3-201ENST00000441064 443 ntBASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 AL591424.1-201ENST00000442569 1213 ntBASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 AL589182.2-201ENST00000619332 1049 ntBASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 PGM5P2-202ENST00000637225 1043 ntBASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
TBC1D3FA6NER0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 BX842568.4-201ENST00000421222 227 ntBASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 SIGLEC30P-201ENST00000455569 941 ntBASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 IGHV3-52-201ENST00000519770 353 ntBASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 AC139530.3-201ENST00000620344 690 ntBASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 AC104581.1-202ENST00000635932 2618 ntBASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TBC1D3FA6NER0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 AC003669.1-201ENST00000334569 611 ntBASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 KRT18P3-201ENST00000451602 1288 ntBASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 STK19B-204ENST00000512515 211 ntBASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 AC148477.5-201ENST00000625164 1645 ntBASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.53■□□□□ 0.4
TBC1D3FA6NER0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms