Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 AC009949.1-201ENST00000623048 1830 ntBASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 C1QBPP2-201ENST00000528754 825 ntBASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 HYMAI-201ENST00000635591 3347 ntBASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MEIS3P1A6NDR6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 FAM197Y1-201ENST00000421178 764 ntBASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 AC073648.6-201ENST00000641589 218 ntBASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MEIS3P1A6NDR6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms