Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC141586.5-201ENST00000624546 2050 ntBASIC20.77■□□□□ 0.92
PTPDC1A2A3K4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPDC1A2A3K4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.77■□□□□ 0.92
PTPDC1A2A3K4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPDC1A2A3K4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PTPDC1A2A3K4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PTPDC1A2A3K4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
PTPDC1A2A3K4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.77■□□□□ 0.91
PTPDC1A2A3K4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PTPDC1A2A3K4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
PTPDC1A2A3K4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 DDX43P3-201ENST00000441064 443 ntBASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 KRT8P10-201ENST00000450021 1447 ntBASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPDC1A2A3K4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 AC079781.3-201ENST00000449110 356 ntBASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 AL353801.3-201ENST00000609898 542 ntBASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPDC1A2A3K4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 HCG11-201ENST00000411553 5696 ntBASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 MTCL1P1-201ENST00000446207 792 ntBASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 FDX1P1-201ENST00000449115 551 ntBASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 AC068472.1-201ENST00000474589 881 ntBASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 BCL2-203ENST00000589955 5011 ntBASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.74■□□□□ 0.91
PTPDC1A2A3K4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms