Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TRBV5-4A0A0C4DH59 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.33■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC046185.3-201ENST00000623228 1824 ntBASIC17.33■□□□□ 0.37
TRBV5-4A0A0C4DH59 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TRBV5-4A0A0C4DH59 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.33■□□□□ 0.37
TRBV5-4A0A0C4DH59 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.33■□□□□ 0.37
TRBV5-4A0A0C4DH59 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 AP005117.1-201ENST00000584346 1413 ntBASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 SIGLEC16-201ENST00000599858 1437 ntBASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 AC139713.2-201ENST00000641328 2723 ntBASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 STK19B-204ENST00000512515 211 ntBASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 AL645608.8-201ENST00000606034 2086 ntBASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.33■□□□□ 0.36
TRBV5-4A0A0C4DH59 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 KLF4P1-201ENST00000412782 1185 ntBASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 SPDYE21P-201ENST00000413323 827 ntBASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 AC091304.2-201ENST00000564639 760 ntBASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-4A0A0C4DH59 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 RBM17P3-201ENST00000417687 1192 ntBASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 DUSP5P1-201ENST00000441325 1139 ntBASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV5-4A0A0C4DH59 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms