Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 RBM17P3-201ENST00000417687 1192 ntBASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 AL160237.2-201ENST00000556165 472 ntBASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 AP001269.4-201ENST00000609611 512 ntBASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 ADM-208ENST00000534464 1640 ntTSL 2 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 BICD1-207ENST00000551848 1962 ntBASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 ABCD1P5-201ENST00000445663 754 ntBASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC009078.2-202ENST00000463353 338 ntBASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 AP002469.2-201ENST00000531724 424 ntBASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 MTDHP3-201ENST00000594186 672 ntBASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC104692.2-201ENST00000603054 253 ntBASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 AL355877.3-201ENST00000622820 899 ntBASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC009949.1-201ENST00000623048 1830 ntBASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC12.75□□□□□ -0.37
IGHV4-28A0A0C4DH34 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IGHV4-28A0A0C4DH34 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms