Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.16□□□□□ -0.3
IGKV3D-20A0A0C4DH25 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AL118508.1-201ENST00000613502 2345 ntBASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 UNC93B2-201ENST00000285383 730 ntBASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 UBE2SP1-201ENST00000450587 669 ntBASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 SEC1P-202ENST00000473944 940 ntBASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AP003071.4-201ENST00000562276 1284 ntBASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AC008687.5-201ENST00000593746 558 ntBASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AC116407.2-201ENST00000613639 860 ntBASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AC116562.4-202ENST00000641738 218 ntBASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
IGKV3D-20A0A0C4DH25 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
IGKV3D-20A0A0C4DH25 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PRORSD1P-201ENST00000295112 541 ntBASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 RBM17P1-201ENST00000453646 1190 ntBASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV3D-20A0A0C4DH25 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.13□□□□□ -0.31
IGKV3D-20A0A0C4DH25 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.13□□□□□ -0.31
IGKV3D-20A0A0C4DH25 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV3D-20A0A0C4DH25 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.13□□□□□ -0.31
IGKV3D-20A0A0C4DH25 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.13□□□□□ -0.31
IGKV3D-20A0A0C4DH25 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.13□□□□□ -0.31
IGKV3D-20A0A0C4DH25 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
IGKV3D-20A0A0C4DH25 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
IGKV3D-20A0A0C4DH25 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms