Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV1A0A0A0MS02 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 AL353692.3-201ENST00000407031 1396 ntBASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 LINC00896-202ENST00000609602 2128 ntBASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 MIR662-201ENST00000384847 95 ntBASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 AC009154.2-201ENST00000621177 724 ntBASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 AC006116.8-202ENST00000587620 1550 ntBASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.85□□□□□ -0.35
TRGV1A0A0A0MS02 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 AC005332.3-201ENST00000589904 676 ntBASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 Z83836.1-201ENST00000624605 1642 ntBASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRGV1A0A0A0MS02 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
TRGV1A0A0A0MS02 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
TRGV1A0A0A0MS02 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TRGV1A0A0A0MS02 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC12.83□□□□□ -0.35
TRGV1A0A0A0MS02 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC12.83□□□□□ -0.35
TRGV1A0A0A0MS02 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC12.83□□□□□ -0.35
TRGV1A0A0A0MS02 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.83□□□□□ -0.35
TRGV1A0A0A0MS02 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms