Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 EEF1DP3-203ENST00000566025 782 ntBASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 REXO1L2P-201ENST00000425429 2069 ntBASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 KRT8P45-201ENST00000414328 1447 ntBASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 AC138969.2-201ENST00000532739 9932 ntBASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 PRAL-201ENST00000624952 3286 ntBASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 AC116353.5-201ENST00000638148 1699 ntBASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 AC026396.1-201ENST00000419388 421 ntBASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 AC008175.2-201ENST00000612840 297 ntBASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
LINC01558Q9Y6Z2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms